RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Tdrd9Q14BI7 1383 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 PtprkP35822 1457 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Ankrd36D3Z4K0 1415 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Rock2P70336 1388 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Isy1Q69ZQ2 285 aaKnown RBP8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Sh3bp5Q9Z131 463 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Arhgef5E9Q7D5 1581 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Ccdc173A0JLY1 547 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Fgd6Q69ZL1 1399 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Zhx1P70121 873 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Drc7Q6V3W6 876 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Arap1Q4LDD4 1452 aa8.67□□□□□ -1.02
Smc1a-201ENSMUST00000045312 MyclP10166 368 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Filip1lQ6P6L0 1131 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Spag9Q58A65 1321 aaKnown RBP8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Rassf8Q8CJ96 419 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Sh3bgrQ9WUZ7 214 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Usp47Q8BY87 1376 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Anapc15P60007 132 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Rpgrip1lQ8CG73 1264 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Ccar1Q8CH18 1146 aaKnown RBP8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Vps8Q0P5W1 1427 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Smarce1O54941 411 aaKnown RBP8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Chmp4cQ9D7F7 232 aa8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 EprsQ8CGC7 1512 aaKnown RBP8.66□□□□□ -1.02
Smc1a-201ENSMUST00000045312 AqrQ8CFQ3 1481 aaKnown RBP8.65□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Q8BT18 775 aa8.65□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Srcin1Q9QWI6 1250 aa8.65□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Pank1Q8K4K6 548 aa8.65□□□□□ -1.02
Smc1a-201ENSMUST00000045312 R3hcc1Q8BSI6 488 aa8.65□□□□□ -1.03
Smc1a-201ENSMUST00000045312 PnisrA2AJT4 805 aaKnown RBP8.65□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Slc4a1apE9PX68 744 aa8.65□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Mical1Q8VDP3 1048 aa8.65□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Mcm4P49717 862 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Stk11ipQ3TAA7 1072 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 PogkQ80TC5 607 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Plin1Q8CGN5 517 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Pank3Q8R2W9 370 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Rock1P70335 1354 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Arhgap31A6X8Z5 1425 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 EzrP26040 586 aaKnown RBP8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Nol12Q8BG17 217 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Plb1Q3TTY0 1478 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Trim58Q5NCC9 485 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Crocc2F6XLV1 1638 aa8.64□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Zfp444Q3TDV8 331 aaKnown RBP8.63□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Prdm16A2A935 1275 aa8.63□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Sptbn5F6UCX4 1208 aa8.63□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Inpp5dQ9ES52 1191 aa8.63□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Tiam1Q60610 1591 aa8.63□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Cwc15Q9JHS9 229 aaKnown RBP8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 CadpsQ80TJ1 1355 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Nsd2Q8BVE8 1365 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 NcapgE9PWG6 1004 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 L3mbtl2P59178 703 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Phactr2B1AVP0 632 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 MecomP14404 1042 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Nap1l3Q794H2 544 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Fam163aQ8CAA5 168 aa8.62□□□□□ -1.03
Smc1a-201ENSMUST00000045312 SynmQ70IV5 1561 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ppp2r3aB2RXC8 1150 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ccdc34Q3UI66 367 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Eif4g2Q62448 906 aaKnown RBP8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Atl3Q91YH5 541 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Arid4aF8VPQ2 1261 aaKnown RBP8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Frmd3Q8BHD4 595 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Olfml1Q8BSH2 233 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ccer1Q9CQL2 403 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Tpm3-rs7D3Z2H9 248 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Tpm3P21107 285 aaKnown RBP8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Cdkn1cP49919 348 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ccdc30Q8BVF4 654 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Clstn1Q9EPL2 979 aa8.61□□□□□ -1.03
Smc1a-201ENSMUST00000045312 CalrP14211 416 aaKnown RBP8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ccdc60Q8C4J0 545 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Stk26Q99JT2 416 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Gse1Q3U3C9 1213 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Cgnl1Q6AW69 1298 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ftsj3Q9DBE9 838 aaKnown RBP8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Brpf1B2RRD7 1212 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Cers3Q1A3B0 383 aa8.6□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Gm14025A2AP89 1413 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Ccdc141E9Q8Q6 1531 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 CastP51125 788 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Q7TT23 1179 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 NgefQ8CHT1 710 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Psme1P97371 249 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Txndc2Q6P902 515 aa8.59□□□□□ -1.03
Smc1a-201ENSMUST00000045312 Trim55G3X8Y1 545 aa8.59□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Nek4Q9Z1J2 792 aa8.59□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Ncapd3Q6ZQK0 1506 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 TchhA0A0B4J1F9 1599 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 A0A0U1RNP2 1173 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Fmnl2A2APV2 1086 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Bicd2Q921C5 820 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Mns1Q61884 491 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Tmem132aQ922P8 1018 aa8.58□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Kcnj4P52189 445 aa8.57□□□□□ -1.04
Smc1a-201ENSMUST00000045312 Hmgn5Q9JL35 406 aa8.57□□□□□ -1.04
Smc1a-201ENSMUST00000045312 CenpjQ569L8 1344 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms