RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Tex14Q7M6U3 1450 aa12.62□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Gm16486A0A1D5RMD1 1434 aa12.62□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Hdac5Q9Z2V6 1113 aa12.61□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 MaddQ80U28 1577 aa12.6□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 AatkQ80YE4 1365 aa12.6□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Nphp4P59240 1425 aa12.6□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Ptch1Q61115 1434 aa12.6□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Exoc6Q8R313 802 aa12.6□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Kdm5aQ3UXZ9 1690 aa12.59□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Knl1Q66JQ7 1612 aa12.59□□□□□ -0.39
Ctnna1-201ENSMUST00000042345 Adgrl3Q80TS3 1537 aa12.58□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Grwd1Q810D6 446 aaKnown RBP12.58□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Arhgap23Q69ZH9 1483 aa12.57□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Pabpn1Q8CCS6 302 aaKnown RBP12.57□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Arid4bA2CG63 1314 aaKnown RBP12.57□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Itsn1Q9Z0R4 1714 aa12.56□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Gm156Q58A37 223 aa12.56□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Lemd3Q9WU40 921 aa12.56□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 PrxO55103 1391 aa12.56□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Qser1A2BIE1 1698 aa12.55□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Wwc2Q6NXJ0 1187 aa12.54□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 CltcQ68FD5 1675 aaKnown RBP12.54□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 RictorQ6QI06 1708 aa12.54□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 ErbinQ80TH2 1402 aa12.53□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Sall3Q62255 1320 aa12.53□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Synj2Q9D2G5 1434 aa12.53□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Ifit1bl1D3Z6F0 470 aa12.52□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 KdrP35918 1367 aa12.52□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Eif2ak4Q9QZ05 1648 aa12.52□□□□□ -0.4
Ctnna1-201ENSMUST00000042345 Kif13aQ9EQW7 1749 aa12.52□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Mrs2Q5NCE8 434 aa12.52□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Ahdc1Q6PAL7 1594 aaKnown RBP12.51□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Kif3bQ61771 747 aa12.51□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Yeats2Q3TUF7 1407 aa12.51□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Gprasp1Q5U4C1 1347 aa12.51□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 PtprmP28828 1452 aa12.5□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 PplQ9R269 1755 aa12.49□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Ttc41Q692V3 1318 aa12.49□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Mink1Q9JM52 1308 aa12.48□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Atf7ipQ7TT18 1306 aa12.48□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Adgrl1Q80TR1 1466 aa12.48□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Skint5A7XUY5 1461 aa12.47□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Mroh3A0A1D5RM54 893 aa12.47□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Arhgef28P97433 1693 aa12.47□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Arid3cA6PWV5 409 aa12.47□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Kank1E9Q238 1360 aa12.46□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 AU022751B1B0V2 589 aa12.46□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Stard8Q8K031 1019 aa12.46□□□□□ -0.41
Ctnna1-201ENSMUST00000042345 Zc3h13E9Q784 1729 aaKnown RBP12.46□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 PalldQ9ET54 1408 aa12.45□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Nrxn1Q9CS84 1514 aa12.45□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Lrrc7Q80TE7 1490 aa12.43□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Rpgrip1lQ8CG73 1264 aa12.43□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 SafbD3YXK2 937 aaKnown RBP12.43□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Zscan10Q3URR7 782 aa12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Pank3Q8R2W9 370 aa12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Srcin1Q9QWI6 1250 aa12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Adamtsl3G3UXC7 1706 aa12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Ttbk1Q6PCN3 1308 aa12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Med14A2ABV5 1459 aaKnown RBP12.42□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 NktrP30415 1453 aa12.41□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Pelp1Q9DBD5 1123 aaKnown RBP12.41□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Hfm1D3Z4R1 1434 aa12.4□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Tmf1B9EKI3 1091 aa12.4□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Erbb3Q61526 1339 aa12.4□□□□□ -0.42
Ctnna1-201ENSMUST00000042345 Zbtb7cQ8VCZ7 619 aa12.4□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Nwd1A6H603 1563 aa12.39□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Abca14E9Q8F8 1683 aa12.39□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Chd2E9PZM4 1827 aaKnown RBP12.39□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 InsrP15208 1372 aa12.39□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Rab3gap2Q8BMG7 1366 aa12.38□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 L3mbtl2P59178 703 aa12.38□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Calr4Q3TQS0 420 aa12.38□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Inpp5dQ9ES52 1191 aa12.38□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Fam184bQ0KK56 942 aa12.37□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Zscan21Q07231 555 aa12.36□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Slc52a2Q9D8F3 450 aa12.36□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 TnikP83510 1323 aa12.36□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Iqsec2Q5DU25 1478 aa12.36□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Q7TT23 1179 aa12.35□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Gemin5Q8BX17 1502 aaKnown RBP12.35□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 NrdcQ8BHG1 1161 aa12.35□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Ppp2r1aQ76MZ3 589 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Ifnlr1Q8CGK5 535 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Prrc2bQ7TPM1 1486 aaKnown RBP12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Cep170bQ80U49 1574 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Dip2aQ8BWT5 1523 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Usp19Q3UJD6 1360 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Usp32F8VPZ3 1604 aa12.34□□□□□ -0.43
Ctnna1-201ENSMUST00000042345 Naip7Q9JIB3 1402 aa12.33□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Usp40Q8BWR4 1235 aa12.33□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Zfp444Q3TDV8 331 aaKnown RBP12.33□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Plekhg1F6S200 1446 aa12.32□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Puf60Q3UEB3 564 aaKnown RBP12.32□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Mak16Q8BGS0 296 aaKnown RBP12.32□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Slc4a1apE9PX68 744 aa12.31□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Gtf2e1Q9D0D5 440 aa12.31□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Kiaa1107Q80TK0 1369 aa12.31□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 NpatQ8BMA5 1420 aa12.31□□□□□ -0.44
Ctnna1-201ENSMUST00000042345 Ofd1Q80Z25 1017 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms