RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 CrbnQ8C7D2 445 aa12.64□□□□□ -0.39
Copb1-201ENSMUST00000033012 Apbb1Q9QXJ1 710 aa12.64□□□□□ -0.39
Copb1-201ENSMUST00000033012 Rgl3Q3UYI5 709 aa12.64□□□□□ -0.39
Copb1-201ENSMUST00000033012 Rps6ka5Q8C050 863 aa12.63□□□□□ -0.39
Copb1-201ENSMUST00000033012 Pnma3Q8JZW8 466 aa12.62□□□□□ -0.39
Copb1-201ENSMUST00000033012 Gzf1Q4VBD9 706 aa12.62□□□□□ -0.39
Copb1-201ENSMUST00000033012 Erich6bQ9D4S6 220 aa12.62□□□□□ -0.39
Copb1-201ENSMUST00000033012 DroshaQ5HZJ0 1373 aaKnown RBP12.62□□□□□ -0.39
Copb1-201ENSMUST00000033012 Chmp4bQ9D8B3 224 aaKnown RBP12.62□□□□□ -0.39
Copb1-201ENSMUST00000033012 Kif2cQ922S8 721 aa12.61□□□□□ -0.39
Copb1-201ENSMUST00000033012 Rlbp1Q9Z275 317 aa12.61□□□□□ -0.39
Copb1-201ENSMUST00000033012 Polr1aO35134 1717 aaKnown RBP12.61□□□□□ -0.39
Copb1-201ENSMUST00000033012 Dhx9O70133 1380 aaKnown RBP12.6□□□□□ -0.39
Copb1-201ENSMUST00000033012 Rrbp1Q99PL5 1605 aaKnown RBP12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 NexmifQ5DTT1 1515 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Cabp1Q9JLK7 227 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Rsph3aQ3UFY4 516 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Igf1rQ60751 1373 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Asxl1P59598 1514 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Iqgap1Q9JKF1 1657 aaKnown RBP12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 AlkP97793 1621 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 Wdr78E9PYY5 807 aa12.59□□□□□ -0.39
Copb1-201ENSMUST00000033012 FanciQ8K368 1330 aa12.58□□□□□ -0.4
Copb1-201ENSMUST00000033012 Tarbp1E9Q368 1579 aa12.58□□□□□ -0.4
Copb1-201ENSMUST00000033012 Abcc5Q9R1X5 1436 aa12.58□□□□□ -0.4
Copb1-201ENSMUST00000033012 NcapgE9PWG6 1004 aa12.58□□□□□ -0.4
Copb1-201ENSMUST00000033012 Tmx3Q8BXZ1 456 aa12.58□□□□□ -0.4
Copb1-201ENSMUST00000033012 Atf7ipQ7TT18 1306 aa12.57□□□□□ -0.4
Copb1-201ENSMUST00000033012 Phlpp2Q8BXA7 1320 aa12.57□□□□□ -0.4
Copb1-201ENSMUST00000033012 Wdr7Q920I9 1489 aa12.57□□□□□ -0.4
Copb1-201ENSMUST00000033012 Cux2P70298 1426 aa12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Plekhh2Q8C115 1491 aa12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Duxf3A0A0N4SV92 674 aa12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Fam13bQ8K2H3 851 aa12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Supt6hQ62383 1726 aaKnown RBP12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Polr3aB2RXC6 1390 aa12.56□□□□□ -0.4
Copb1-201ENSMUST00000033012 Zhx1P70121 873 aa12.55□□□□□ -0.4
Copb1-201ENSMUST00000033012 Ccdc30Q8BVF4 654 aa12.55□□□□□ -0.4
Copb1-201ENSMUST00000033012 Nsfl1cQ9CZ44 370 aaKnown RBP12.55□□□□□ -0.4
Copb1-201ENSMUST00000033012 Ncapd2Q8K2Z4 1392 aa12.55□□□□□ -0.4
Copb1-201ENSMUST00000033012 Gtpbp6Q3U6U5 514 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Arhgef40Q3UPH7 1517 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Kdm3bQ6ZPY7 1562 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Kif15Q6P9L6 1387 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Mfap1aC0HKD8 439 aaKnown RBP12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Mfap1bC0HKD9 439 aaKnown RBP12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Pank2Q3U4S0 443 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 Pank3Q8R2W9 370 aa12.54□□□□□ -0.4
Copb1-201ENSMUST00000033012 PrxO55103 1391 aa12.53□□□□□ -0.4
Copb1-201ENSMUST00000033012 Atl3Q91YH5 541 aa12.53□□□□□ -0.4
Copb1-201ENSMUST00000033012 Pank1Q8K4K6 548 aa12.53□□□□□ -0.4
Copb1-201ENSMUST00000033012 Gm45140A0A0N4SUM8 220 aa12.52□□□□□ -0.4
Copb1-201ENSMUST00000033012 Mindy4Q3UQI9 744 aa12.52□□□□□ -0.4
Copb1-201ENSMUST00000033012 Fam114a1Q9D281 569 aa12.52□□□□□ -0.4
Copb1-201ENSMUST00000033012 MsnP26041 577 aaKnown RBP12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Trim58Q5NCC9 485 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Kank4Q6P9J5 1016 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Speer4f1Q9D5Q6 258 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Usp19Q3UJD6 1360 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 BC005561E9Q5E2 1589 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Grpel1Q99LP6 217 aa12.52□□□□□ -0.41
Copb1-201ENSMUST00000033012 Fam135bQ9DAI6 1403 aa12.51□□□□□ -0.41
Copb1-201ENSMUST00000033012 Rbm25B2RY56 838 aaKnown RBP12.51□□□□□ -0.41
Copb1-201ENSMUST00000033012 Cbx1P83917 185 aaKnown RBP12.51□□□□□ -0.41
Copb1-201ENSMUST00000033012 Kif3aP28741 701 aa12.5□□□□□ -0.41
Copb1-201ENSMUST00000033012 Grwd1Q810D6 446 aaKnown RBP12.5□□□□□ -0.41
Copb1-201ENSMUST00000033012 Pnmal2G3X9N3 661 aa12.5□□□□□ -0.41
Copb1-201ENSMUST00000033012 Zscan10Q3URR7 782 aa12.5□□□□□ -0.41
Copb1-201ENSMUST00000033012 Plcd3Q8K2J0 785 aa12.5□□□□□ -0.41
Copb1-201ENSMUST00000033012 Gm10093D3YYI8 482 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 Hdac1O09106 482 aaKnown RBP12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 MpndQ3TV65 487 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 Atp2b3Q0VF55 1220 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 Ppp2r1aQ76MZ3 589 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 Rab3gap2Q8BMG7 1366 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 Inpp5dQ9ES52 1191 aa12.49□□□□□ -0.41
Copb1-201ENSMUST00000033012 PtmaP26350 111 aa12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Atad2bE9Q166 1460 aaKnown RBP12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Rfx1P48377 963 aa12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Ercc6lQ8BHK9 1240 aa12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Gtpbp4Q99ME9 634 aaKnown RBP12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Il16O54824 1322 aa12.48□□□□□ -0.41
Copb1-201ENSMUST00000033012 Myom2Q14BI5 1463 aa12.47□□□□□ -0.41
Copb1-201ENSMUST00000033012 ImpactO55091 318 aa12.47□□□□□ -0.41
Copb1-201ENSMUST00000033012 Nectin2P32507 530 aa12.47□□□□□ -0.41
Copb1-201ENSMUST00000033012 Eif4g3Q80XI3 1579 aaKnown RBP12.46□□□□□ -0.41
Copb1-201ENSMUST00000033012 Inpp5bQ8K337 993 aa12.46□□□□□ -0.41
Copb1-201ENSMUST00000033012 Tbc1d31Q6NXY1 996 aa12.46□□□□□ -0.42
Copb1-201ENSMUST00000033012 Zfp251Q6PCX8 632 aa12.46□□□□□ -0.42
Copb1-201ENSMUST00000033012 Bag4Q8CI61 457 aa12.46□□□□□ -0.42
Copb1-201ENSMUST00000033012 Kdm4cQ8VCD7 1054 aa12.46□□□□□ -0.42
Copb1-201ENSMUST00000033012 Znf326O88291 580 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Adgrb2Q8CGM1 1561 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Ttll5Q8CHB8 1328 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Kdm6bQ5NCY0 1641 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Trpm2Q91YD4 1506 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Sbno1Q689Z5 1390 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Zscan25B2RX31 543 aa12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Cald1E9QA15 768 aaKnown RBP12.45□□□□□ -0.42
Copb1-201ENSMUST00000033012 Cers3Q1A3B0 383 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms