RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Zmym4A2A791 1549 aaKnown RBP23.23■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Pbrm1Q8BSQ9 1634 aaKnown RBP23.23■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Pank1Q8K4K6 548 aa23.22■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Ak9G3UYQ4 1894 aa23.22■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Golga2Q921M4 999 aa23.22■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Sart3Q9JLI8 962 aaKnown RBP23.21■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Fam208aQ69ZR9 1610 aaKnown RBP23.21■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Hsp90aa1P07901 733 aaKnown RBP23.21■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Edc4Q3UJB9 1406 aaKnown RBP23.2■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Adgrl2Q8JZZ7 1487 aa23.2■■□□□ 1.31
Ptpra-201ENSMUST00000028769 Dnmt1P13864 1620 aaKnown RBP23.2■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Atxn3Q9CVD2 355 aa23.2■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Senp3Q9EP97 568 aaKnown RBP23.2■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Rab3gap2Q8BMG7 1366 aa23.19■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Znf608Q56A10 1511 aa23.18■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Prdm16A2A935 1275 aa23.17■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Stag3O70576 1240 aa23.17■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Rusc2Q80U22 1514 aa23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Zranb1Q7M760 708 aa23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 AI481877A2ALV5 1481 aa23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Stk26Q99JT2 416 aa23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Iqgap1Q9JKF1 1657 aaKnown RBP23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 EspnQ9ET47 871 aa23.16■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Atp10dQ8K2X1 1416 aa23.15■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Adamts13Q769J6 1426 aa23.14■■□□□ 1.3
Ptpra-201ENSMUST00000028769 Lemd3Q9WU40 921 aa23.13■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Apaf1O88879 1249 aa23.12■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Eif2s2Q99L45 331 aaKnown RBP23.12■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Hdac5Q9Z2V6 1113 aa23.09■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Nsd2Q8BVE8 1365 aa23.08■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Eif4g3Q80XI3 1579 aaKnown RBP23.08■■□□□ 1.29
Ptpra-201ENSMUST00000028769 Puf60Q3UEB3 564 aaKnown RBP23.08■■□□□ 1.29
Ptpra-201ENSMUST00000028769 NudcO35685 332 aaKnown RBP23.08■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Ttc21bQ0HA38 1315 aa23.07■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Plekhh1Q80TI1 1356 aa23.07■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Hsp90ab1P11499 724 aaKnown RBP23.07■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Gm16486A0A1D5RMD1 1434 aa23.07■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Tex14Q7M6U3 1450 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Tulp4Q9JIL5 1547 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Dnai1Q8C0M8 701 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 ErbinQ80TH2 1402 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Amer1Q7TS75 1132 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Cluap1Q8R3P7 413 aa23.06■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Gm32742A0A1B0GT42 1604 aa23.04■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Ak7Q9D2H2 614 aa23.04■■□□□ 1.28
Ptpra-201ENSMUST00000028769 U2af1Q9D883 239 aaKnown RBP23.03■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Kdm2bQ6P1G2 1309 aa23.03■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Nkx1-2P42580 305 aa23.03■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Znf330Q922H9 316 aa23.03■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Abcc6Q9R1S7 1498 aa23.02■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Plch2A2AP18 1501 aa23.02■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Ksr2Q3UVC0 959 aa23.02■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Mbd3Q9Z2D8 285 aaKnown RBP23.02■■□□□ 1.28
Ptpra-201ENSMUST00000028769 Gapvd1Q6PAR5 1458 aa23.01■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Spryd3E9Q9B3 442 aa22.99■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Rrbp1Q99PL5 1605 aaKnown RBP22.98■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Usp54Q8BL06 1588 aaKnown RBP22.98■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Mast1Q9R1L5 1570 aa22.98■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Exosc9Q9JHI7 438 aaKnown RBP22.98■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Cdc42bpbQ7TT50 1713 aa22.97■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Usp19Q3UJD6 1360 aa22.97■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Gm6268A2A3U9 297 aa22.97■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Arid4bA2CG63 1314 aaKnown RBP22.97■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Smc5Q8CG46 1101 aaKnown RBP22.97■■□□□ 1.27
Ptpra-201ENSMUST00000028769 Abcc1O35379 1528 aa22.96■■□□□ 1.27
Ptpra-201ENSMUST00000028769 KarsQ99MN1 595 aaKnown RBP22.95■■□□□ 1.27
Ptpra-201ENSMUST00000028769 GsdmaQ9EST1 446 aa22.95■■□□□ 1.27
Ptpra-201ENSMUST00000028769 P2rx7Q9Z1M0 595 aa22.95■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Ppp1r3fQ9JIG4 799 aa22.95■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Kiaa1107Q80TK0 1369 aa22.93■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Tsen2Q6P7W5 460 aa22.93■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Mink1Q9JM52 1308 aa22.93■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Rlbp1Q9Z275 317 aa22.93■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Uspl1Q3ULM6 1089 aa22.92■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Sbno1Q689Z5 1390 aa22.92■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Ppip5k1A2ARP1 1436 aa22.91■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Pnmal2G3X9N3 661 aa22.9■■□□□ 1.26
Ptpra-201ENSMUST00000028769 IqubQ8CDK3 788 aa22.9■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Cep170Q6A065 1588 aa22.9■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Tubgcp6G5E8P0 1769 aa22.89■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Ipo8Q7TMY7 1010 aa22.89■■□□□ 1.26
Ptpra-201ENSMUST00000028769 Ylpm1Q9R0I7 1386 aaKnown RBP22.89■■□□□ 1.26
Ptpra-201ENSMUST00000028769 TnikP83510 1323 aa22.89■■□□□ 1.25
Ptpra-201ENSMUST00000028769 AatkQ80YE4 1365 aa22.88■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Nutm1Q8BHP2 1126 aa22.88■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Ppm1gQ61074 542 aa22.88■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Ralbp1Q62172 648 aa22.88■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Plin1Q8CGN5 517 aa22.88■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Rnf17Q99MV7 1640 aa22.87■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Setd1aE9PYH6 1716 aa22.87■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Duxf3A0A0N4SV92 674 aa22.87■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Ccdc183A2AJB1 534 aa22.87■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Ythdc2B2RR83 1445 aaKnown RBP22.87■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Cfap74Q3UY96 1578 aa22.86■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Kif1bQ60575 1816 aaKnown RBP22.86■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Znf316Q6PGE4 1016 aa22.85■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Atf7ipQ7TT18 1306 aa22.84■■□□□ 1.25
Ptpra-201ENSMUST00000028769 ShprhQ7TPQ3 1674 aa22.83■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Irx3P81067 507 aa22.83■■□□□ 1.25
Ptpra-201ENSMUST00000028769 Abcc3B2RX12 1523 aa22.83■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms