RNA–Protein interactions for RNA: ENSMUST00000001522.9

Def8-201, Transcript of Differentially expressed in FDCP 8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Def8, Length 3,214 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Def8-201ENSMUST00000001522 AI481877A2ALV5 1481 aa11.71□□□□□ -0.54
Def8-201ENSMUST00000001522 Rnf17Q99MV7 1640 aa11.7□□□□□ -0.54
Def8-201ENSMUST00000001522 CanxP35564 591 aaKnown RBP11.7□□□□□ -0.54
Def8-201ENSMUST00000001522 Rab3gap2Q8BMG7 1366 aa11.7□□□□□ -0.54
Def8-201ENSMUST00000001522 Cep170Q6A065 1588 aa11.69□□□□□ -0.54
Def8-201ENSMUST00000001522 Robo2Q7TPD3 1470 aa11.69□□□□□ -0.54
Def8-201ENSMUST00000001522 Tspyl2Q7TQI8 677 aa11.69□□□□□ -0.54
Def8-201ENSMUST00000001522 Kif7B7ZNG0 1348 aa11.69□□□□□ -0.54
Def8-201ENSMUST00000001522 Sart3Q9JLI8 962 aaKnown RBP11.69□□□□□ -0.54
Def8-201ENSMUST00000001522 Fgd6Q69ZL1 1399 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Cnga1P29974 684 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Dcaf11Q91VU6 549 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Stk24Q99KH8 431 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Chmp5Q9D7S9 219 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Gm14025A2AP89 1413 aa11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Usp54Q8BL06 1588 aaKnown RBP11.68□□□□□ -0.54
Def8-201ENSMUST00000001522 Gm20521D3Z5F7 333 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Ccdc30Q8BVF4 654 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Znf608Q56A10 1511 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Pdcd11Q6NS46 1862 aaKnown RBP11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Sbno1Q689Z5 1390 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 DaxxO35613 739 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Usp19Q3UJD6 1360 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Fan1Q69ZT1 1020 aa11.67□□□□□ -0.54
Def8-201ENSMUST00000001522 Nlrp6Q91WS2 869 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 ShprhQ7TPQ3 1674 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Abcc6Q9R1S7 1498 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Prdm16A2A935 1275 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Abcc3B2RX12 1523 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Plekhh1Q80TI1 1356 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Arid4bA2CG63 1314 aaKnown RBP11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 Ttc41Q692V3 1318 aa11.66□□□□□ -0.54
Def8-201ENSMUST00000001522 EspnQ9ET47 871 aa11.65□□□□□ -0.54
Def8-201ENSMUST00000001522 Kif3bQ61771 747 aa11.65□□□□□ -0.54
Def8-201ENSMUST00000001522 Cfap74Q3UY96 1578 aa11.64□□□□□ -0.55
Def8-201ENSMUST00000001522 NudcO35685 332 aaKnown RBP11.64□□□□□ -0.55
Def8-201ENSMUST00000001522 4930567H17RikQ3V0K5 233 aa11.64□□□□□ -0.55
Def8-201ENSMUST00000001522 Usp40Q8BWR4 1235 aa11.64□□□□□ -0.55
Def8-201ENSMUST00000001522 Atp10dQ8K2X1 1416 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Smc5Q8CG46 1101 aaKnown RBP11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Pank1Q8K4K6 548 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Gtf2e1Q9D0D5 440 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Mbd3Q9Z2D8 285 aaKnown RBP11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Clasp1Q80TV8 1535 aaKnown RBP11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Atxn3Q9CVD2 355 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Col17a1Q07563 1470 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Atf7ipQ7TT18 1306 aa11.63□□□□□ -0.55
Def8-201ENSMUST00000001522 Kiaa1107Q80TK0 1369 aa11.62□□□□□ -0.55
Def8-201ENSMUST00000001522 Neurl4Q5NCX5 1563 aa11.62□□□□□ -0.55
Def8-201ENSMUST00000001522 Kif1bQ60575 1816 aaKnown RBP11.62□□□□□ -0.55
Def8-201ENSMUST00000001522 Pola1P33609 1465 aa11.62□□□□□ -0.55
Def8-201ENSMUST00000001522 NhsB1AV60 1647 aa11.62□□□□□ -0.55
Def8-201ENSMUST00000001522 ArxO35085 564 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Golga2Q921M4 999 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Nsd2Q8BVE8 1365 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 4933416C03RikQ3V063 378 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Eif2s2Q99L45 331 aaKnown RBP11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Armcx1Q9CX83 456 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Kidins220E9Q9B7 1793 aa11.61□□□□□ -0.55
Def8-201ENSMUST00000001522 Hecw1Q8K4P8 1604 aa11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Trim30dE9PWL0 497 aa11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Dnai1Q8C0M8 701 aa11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 P2rx7Q9Z1M0 595 aa11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Abcc1O35379 1528 aa11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Srpk2O54781 681 aaKnown RBP11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Xrn1P97789 1719 aaKnown RBP11.6□□□□□ -0.55
Def8-201ENSMUST00000001522 Gtf3c3Q3TMP1 882 aa11.59□□□□□ -0.55
Def8-201ENSMUST00000001522 Ttc21bQ0HA38 1315 aa11.59□□□□□ -0.55
Def8-201ENSMUST00000001522 Ak7Q9D2H2 614 aa11.59□□□□□ -0.55
Def8-201ENSMUST00000001522 Rlbp1Q9Z275 317 aa11.58□□□□□ -0.56
Def8-201ENSMUST00000001522 Uspl1Q3ULM6 1089 aa11.58□□□□□ -0.56
Def8-201ENSMUST00000001522 Trim26Q99PN3 545 aa11.58□□□□□ -0.56
Def8-201ENSMUST00000001522 Polr3glQ8R0C0 218 aa11.58□□□□□ -0.56
Def8-201ENSMUST00000001522 Myo3aQ8K3H5 1613 aa11.57□□□□□ -0.56
Def8-201ENSMUST00000001522 Abca8bQ8K440 1620 aa11.57□□□□□ -0.56
Def8-201ENSMUST00000001522 Uggt2E9Q4X2 1504 aa11.57□□□□□ -0.56
Def8-201ENSMUST00000001522 Arid3cA6PWV5 409 aa11.57□□□□□ -0.56
Def8-201ENSMUST00000001522 Ylpm1Q9R0I7 1386 aaKnown RBP11.56□□□□□ -0.56
Def8-201ENSMUST00000001522 Abca17E9PX95 1733 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Kdm5aQ3UXZ9 1690 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Irx3P81067 507 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 AatkQ80YE4 1365 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Itsn2Q9Z0R6 1659 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 ErbinQ80TH2 1402 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Chd1P40201 1711 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Duxf3A0A0N4SV92 674 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Plcd4Q8K3R3 807 aa11.55□□□□□ -0.56
Def8-201ENSMUST00000001522 Ecm2Q5FW85 670 aa11.54□□□□□ -0.56
Def8-201ENSMUST00000001522 Apaf1O88879 1249 aa11.54□□□□□ -0.56
Def8-201ENSMUST00000001522 Ppp1r3fQ9JIG4 799 aa11.54□□□□□ -0.56
Def8-201ENSMUST00000001522 Pnmal2G3X9N3 661 aa11.54□□□□□ -0.56
Def8-201ENSMUST00000001522 Puf60Q3UEB3 564 aaKnown RBP11.54□□□□□ -0.56
Def8-201ENSMUST00000001522 Myo5cE9Q1F5 1742 aa11.53□□□□□ -0.56
Def8-201ENSMUST00000001522 Zranb1Q7M760 708 aa11.53□□□□□ -0.56
Def8-201ENSMUST00000001522 Abca6Q8K441 1624 aa11.53□□□□□ -0.56
Def8-201ENSMUST00000001522 Hsp90ab1P11499 724 aaKnown RBP11.53□□□□□ -0.56
Def8-201ENSMUST00000001522 Mre11Q61216 706 aa11.52□□□□□ -0.56
Def8-201ENSMUST00000001522 Myom1Q62234 1667 aaKnown RBP11.52□□□□□ -0.56
Def8-201ENSMUST00000001522 Ccdc183A2AJB1 534 aa11.52□□□□□ -0.57
Def8-201ENSMUST00000001522 Ipo8Q7TMY7 1010 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms