RNA–Protein interactions for RNA: snR72

snR72, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR72, Length 98 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR72	snR72	OPY1	P38271	328 aa		0.51	□□□□□ -2.33
snR72	snR72	SIP3	P38717	1229 aa		0.51	□□□□□ -2.33
snR72	snR72	GVP36	P40531	326 aa	Known RBP	0.51	□□□□□ -2.33
snR72	snR72	YAE1	P47118	141 aa	Predicted RBP	0.51	□□□□□ -2.33
snR72	snR72	RPL37B	P51402	88 aa	Known RBP	0.51	□□□□□ -2.33
snR72	snR72	RCE1	Q03530	315 aa		0.51	□□□□□ -2.33
snR72	snR72	YOR029W	Q12243	111 aa		0.51	□□□□□ -2.33
snR72	snR72	ATG31	Q12421	196 aa		0.51	□□□□□ -2.33
snR72	snR72	ATG40	Q99325	256 aa		0.51	□□□□□ -2.33
snR72	snR72	PDR18	P53756	1333 aa		0.5	□□□□□ -2.33
snR72	snR72	TCP1	P12612	559 aa	Known RBP	0.5	□□□□□ -2.33
snR72	snR72	RPO26	P20435	155 aa		0.5	□□□□□ -2.33
snR72	snR72	PRE6	P40303	254 aa	Known RBP	0.5	□□□□□ -2.33
snR72	snR72	SOK1	P40317	901 aa		0.5	□□□□□ -2.33
snR72	snR72	HUA1	P40325	198 aa		0.5	□□□□□ -2.33
snR72	snR72	YFL065C	P43539	102 aa		0.5	□□□□□ -2.33
snR72	snR72	PRM8	P53174	237 aa		0.5	□□□□□ -2.33
snR72	snR72	YNR077C	P53758	84 aa		0.5	□□□□□ -2.33
snR72	snR72	CWC27	Q02770	301 aa		0.5	□□□□□ -2.33
snR72	snR72	SRL4	Q03085	281 aa		0.5	□□□□□ -2.33
snR72	snR72	GAS3	Q03655	524 aa		0.5	□□□□□ -2.33
snR72	snR72	AIM36	Q03798	255 aa		0.5	□□□□□ -2.33
snR72	snR72	YLR236C	A0A023PZG4	107 aa		0.49	□□□□□ -2.33
snR72	snR72	TIM9	O74700	87 aa		0.49	□□□□□ -2.33
snR72	snR72	RPT5	P33297	434 aa	Known RBP	0.49	□□□□□ -2.33
snR72	snR72	NTF2	P33331	125 aa	Known RBP	0.49	□□□□□ -2.33
snR72	snR72	SRY1	P36007	326 aa		0.49	□□□□□ -2.33
snR72	snR72	SKG1	P36169	355 aa		0.49	□□□□□ -2.33
snR72	snR72	YBR285W	P38354	144 aa		0.49	□□□□□ -2.33
snR72	snR72	ARO8	P53090	500 aa	Known RBP	0.49	□□□□□ -2.33
snR72	snR72	CUE4	Q04201	117 aa	Predicted RBP	0.49	□□□□□ -2.33
snR72	snR72	YLR283W	Q05867	314 aa		0.49	□□□□□ -2.33
snR72	snR72	YLR173W	Q06247	608 aa		0.49	□□□□□ -2.33
snR72	snR72	YHR007C-A	Q07074	71 aa		0.49	□□□□□ -2.33
snR72	snR72	RRP36	Q12481	300 aa	Predicted RBP	0.49	□□□□□ -2.33
snR72	snR72	SIR2	P06700	562 aa		0.48	□□□□□ -2.33
snR72	snR72	NSP1	P14907	823 aa	Known RBP	0.48	□□□□□ -2.33
snR72	snR72	SEC11	P15367	167 aa		0.48	□□□□□ -2.33
snR72	snR72	SEC17	P32602	292 aa		0.48	□□□□□ -2.33
snR72	snR72	YER034W	P40022	185 aa	Known RBP	0.48	□□□□□ -2.33
snR72	snR72	FMC1	P40491	155 aa		0.48	□□□□□ -2.33
snR72	snR72	FAR7	P43592	221 aa		0.48	□□□□□ -2.33
snR72	snR72	TRM9	P49957	279 aa		0.48	□□□□□ -2.33
snR72	snR72	NSA1	P53136	463 aa	Predicted RBP	0.48	□□□□□ -2.33
snR72	snR72	MCP1	Q12106	302 aa		0.48	□□□□□ -2.33
snR72	snR72	YOL107W	Q12239	342 aa		0.48	□□□□□ -2.33
snR72	snR72	MED4	Q12343	284 aa		0.48	□□□□□ -2.33
snR72	snR72	TUS1	Q06412	1307 aa		0.47	□□□□□ -2.33
snR72	snR72	URA6	P15700	204 aa		0.47	□□□□□ -2.33
snR72	snR72	CDC10	P25342	322 aa	Known RBP	0.47	□□□□□ -2.33
snR72	snR72	SSO1	P32867	290 aa		0.47	□□□□□ -2.33
snR72	snR72	BNA6	P43619	295 aa		0.47	□□□□□ -2.33
snR72	snR72	RPC17	P47076	161 aa		0.47	□□□□□ -2.33
snR72	snR72	LIA1	P47120	325 aa	Known RBP	0.47	□□□□□ -2.33
snR72	snR72	YNL134C	P53912	376 aa	Known RBP	0.47	□□□□□ -2.33
snR72	snR72	FYV6	P53913	173 aa		0.47	□□□□□ -2.33
snR72	snR72	CDC123	Q05791	360 aa		0.47	□□□□□ -2.33
snR72	snR72	LCL2	Q08045	131 aa		0.47	□□□□□ -2.33
snR72	snR72	TDA8	Q6B2U8	126 aa		0.47	□□□□□ -2.33
snR72	snR72	URA5	P13298	226 aa	Known RBP	0.46	□□□□□ -2.34
snR72	snR72	DBF2	P22204	572 aa		0.46	□□□□□ -2.34
snR72	snR72	TCA17	P32613	152 aa		0.46	□□□□□ -2.34
snR72	snR72	RIB7	P33312	244 aa		0.46	□□□□□ -2.34
snR72	snR72	YUH1	P35127	236 aa		0.46	□□□□□ -2.34
snR72	snR72	EAF6	P47128	113 aa		0.46	□□□□□ -2.34
snR72	snR72	MIC26	P50087	233 aa		0.46	□□□□□ -2.34
snR72	snR72	BRR6	P53062	197 aa		0.46	□□□□□ -2.34
snR72	snR72	YNL247W	P53852	767 aa	Known RBP	0.46	□□□□□ -2.34
snR72	snR72	RAD28	Q12021	506 aa		0.46	□□□□□ -2.34
snR72	snR72	ECM4	P36156	370 aa		0.45	□□□□□ -2.34
snR72	snR72	VMA22	P38784	181 aa		0.45	□□□□□ -2.34
snR72	snR72	RRT8	Q08219	342 aa		0.45	□□□□□ -2.34
snR72	snR72	MDM35	O60200	86 aa		0.44	□□□□□ -2.34
snR72	snR72	CDC28	P00546	298 aa	Known RBP	0.44	□□□□□ -2.34
snR72	snR72	KSS1	P14681	368 aa		0.44	□□□□□ -2.34
snR72	snR72	BET1	P22804	142 aa		0.44	□□□□□ -2.34
snR72	snR72	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
snR72	snR72	APS1	P35181	156 aa		0.44	□□□□□ -2.34
snR72	snR72	UTP30	P36144	274 aa	Known RBP	0.44	□□□□□ -2.34
snR72	snR72	LDB7	P38210	180 aa		0.44	□□□□□ -2.34
snR72	snR72	COX15	P40086	486 aa		0.44	□□□□□ -2.34
snR72	snR72	HYR1	P40581	163 aa	Known RBP	0.44	□□□□□ -2.34
snR72	snR72	YDR249C	Q03787	373 aa		0.44	□□□□□ -2.34
snR72	snR72	DRS2	P39524	1355 aa		0.44	□□□□□ -2.34
snR72	snR72	YHR212W-A	P0CX91	67 aa		0.43	□□□□□ -2.34
snR72	snR72	RPB3	P16370	318 aa	Known RBP	0.43	□□□□□ -2.34
snR72	snR72	HPA3	P39979	161 aa		0.43	□□□□□ -2.34
snR72	snR72	YFH7	P43591	353 aa		0.43	□□□□□ -2.34
snR72	snR72	BXI1	P48558	297 aa		0.43	□□□□□ -2.34
snR72	snR72	UBC12	P52491	188 aa		0.43	□□□□□ -2.34
snR72	snR72	YGR050C	P53231	118 aa		0.43	□□□□□ -2.34
snR72	snR72	YMR252C	Q04814	134 aa		0.43	□□□□□ -2.34
snR72	snR72	YPR174C	Q06616	221 aa	Predicted RBP	0.43	□□□□□ -2.34
snR72	snR72	SEC4	P07560	215 aa	Known RBP	0.42	□□□□□ -2.34
snR72	snR72	RPL27A	P0C2H6	136 aa	Known RBP	0.42	□□□□□ -2.34
snR72	snR72	YCR016W	P25617	290 aa	Known RBP	0.42	□□□□□ -2.34
snR72	snR72	PTM1	P32857	523 aa		0.42	□□□□□ -2.34
snR72	snR72	DAD4	P69851	72 aa		0.42	□□□□□ -2.34
snR72	snR72	YDR274C	P87283	123 aa		0.42	□□□□□ -2.34
snR72	snR72	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms