RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 UBC8P28263 218 aa-0.84□□□□□ -2.54
snR55snR55 GVP36P40531 326 aaKnown RBP-0.84□□□□□ -2.54
snR55snR55 RHO3Q00245 231 aaKnown RBP-0.84□□□□□ -2.54
snR55snR55 SNZ1Q03148 297 aa-0.84□□□□□ -2.54
snR55snR55 TSC3Q3E790 80 aa-0.84□□□□□ -2.54
snR55snR55 FAS1P07149 2051 aaKnown RBP-0.85□□□□□ -2.55
snR55snR55 TIM9O74700 87 aa-0.85□□□□□ -2.55
snR55snR55 SEN2P16658 377 aa-0.85□□□□□ -2.55
snR55snR55 YHR127WP38833 243 aaKnown RBP-0.85□□□□□ -2.55
snR55snR55 YPL073CP40323 161 aa-0.85□□□□□ -2.55
snR55snR55 USE1P53146 245 aa-0.85□□□□□ -2.55
snR55snR55 SPT7P35177 1332 aa-0.86□□□□□ -2.55
snR55snR55 COX2P00410 251 aa-0.86□□□□□ -2.55
snR55snR55 ATG22P25568 528 aa-0.86□□□□□ -2.55
snR55snR55 YFL051CP43552 160 aa-0.86□□□□□ -2.55
snR55snR55 DID2P69771 204 aa-0.86□□□□□ -2.55
snR55snR55 BNA7Q04066 261 aa-0.86□□□□□ -2.55
snR55snR55 LPP1Q04396 274 aa-0.86□□□□□ -2.55
snR55snR55 YLR413WQ06689 675 aa-0.86□□□□□ -2.55
snR55snR55 YKL075CP36083 450 aa-0.87□□□□□ -2.55
snR55snR55 POP4P38336 279 aa-0.87□□□□□ -2.55
snR55snR55 YBR285WP38354 144 aa-0.87□□□□□ -2.55
snR55snR55 BFR1P38934 470 aaKnown RBP RIP-Chip data-0.87□□□□□ -2.55not detected
snR55snR55 GCN20P43535 752 aaKnown RBP-0.87□□□□□ -2.55
snR55snR55 TRX1P22217 103 aaKnown RBP-0.88□□□□□ -2.55
snR55snR55 RPB7P34087 171 aa-0.88□□□□□ -2.55
snR55snR55 MRPL28P36527 147 aa-0.88□□□□□ -2.55
snR55snR55 YBR242WP38331 238 aa-0.88□□□□□ -2.55
snR55snR55 YAR064WP39563 99 aa-0.88□□□□□ -2.55
snR55snR55 YMD8Q03697 442 aa-0.88□□□□□ -2.55
snR55snR55 ODC2Q99297 307 aa-0.88□□□□□ -2.55
snR55snR55 TPM1P17536 199 aaKnown RBP-0.89□□□□□ -2.55
snR55snR55 DOG2P38773 246 aa-0.89□□□□□ -2.55
snR55snR55 YMR144WP40214 342 aaKnown RBP-0.89□□□□□ -2.55
snR55snR55 MGA1P53050 456 aa-0.89□□□□□ -2.55
snR55snR55 YDR209CQ03480 137 aa-0.89□□□□□ -2.55
snR55snR55 YPR174CQ06616 221 aaPredicted RBP-0.89□□□□□ -2.55
snR55snR55 REX3Q12090 404 aa-0.89□□□□□ -2.55
snR55snR55 MCP1Q12106 302 aa-0.89□□□□□ -2.55
snR55snR55 MDY2Q12285 212 aa-0.89□□□□□ -2.55
snR55snR55 AHT1P29589 182 aa-0.9□□□□□ -2.55
snR55snR55 YJR111CP47148 283 aaKnown RBP-0.9□□□□□ -2.55
snR55snR55 SEC17P32602 292 aa-0.91□□□□□ -2.56
snR55snR55 YHL018WP38744 120 aaPredicted RBP-0.91□□□□□ -2.56
snR55snR55 YAR1P46683 200 aa-0.91□□□□□ -2.56
snR55snR55 COX20Q04935 205 aa-0.91□□□□□ -2.56
snR55snR55 YLR126CQ12288 251 aa-0.91□□□□□ -2.56
snR55snR55 MRP1P10662 321 aaKnown RBP-0.92□□□□□ -2.56
snR55snR55 DAL80P26343 269 aa-0.92□□□□□ -2.56
snR55snR55 YJR149WP47177 404 aa-0.92□□□□□ -2.56
snR55snR55 ADH6Q04894 360 aaKnown RBP-0.92□□□□□ -2.56
snR55snR55 FIT2Q08906 153 aa-0.92□□□□□ -2.56
snR55snR55 SNU23Q12368 194 aaPredicted RBP-0.92□□□□□ -2.56
snR55snR55 RPL27AP0C2H6 136 aaKnown RBP-0.93□□□□□ -2.56
snR55snR55 SRB4P32569 687 aa-0.93□□□□□ -2.56
snR55snR55 DAD4P69851 72 aa-0.93□□□□□ -2.56
snR55snR55 MET31Q03081 177 aa-0.93□□□□□ -2.56
snR55snR55 UPS3Q04006 179 aa-0.93□□□□□ -2.56
snR55snR55 CSM4Q08955 156 aa-0.93□□□□□ -2.56
snR55snR55 BTS1Q12051 335 aa-0.93□□□□□ -2.56
snR55snR55 YPR013CQ12145 317 aa-0.93□□□□□ -2.56
snR55snR55 KRR1P25586 316 aaPredicted RBP-0.94□□□□□ -2.56
snR55snR55 HHY1P39982 102 aa-0.94□□□□□ -2.56
snR55snR55 DCV1P43595 202 aa-0.94□□□□□ -2.56
snR55snR55 NUP84P52891 726 aa-0.94□□□□□ -2.56
snR55snR55 MPC3P53311 146 aa-0.94□□□□□ -2.56
snR55snR55 TAR1Q8TGM6 124 aa-0.94□□□□□ -2.56
snR55snR55 HFA1P32874 2273 aa-0.94□□□□□ -2.56
snR55snR55 COX8P04039 78 aa-0.95□□□□□ -2.56
snR55snR55 MSF1P08425 469 aa-0.95□□□□□ -2.56
snR55snR55 POL30P15873 258 aaKnown RBP-0.95□□□□□ -2.56
snR55snR55 DBP3P20447 523 aaKnown RBP-0.95□□□□□ -2.56
snR55snR55 DAL82P21705 255 aa-0.95□□□□□ -2.56
snR55snR55 SPO13P23624 291 aa-0.95□□□□□ -2.56
snR55snR55 UTP30P36144 274 aaKnown RBP-0.95□□□□□ -2.56
snR55snR55 YDR274CP87283 123 aa-0.95□□□□□ -2.56
snR55snR55 LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.95□□□□□ -2.56not detected
snR55snR55 LSO2Q3E772 92 aaKnown RBP-0.95□□□□□ -2.56
snR55snR55 MGM101P32787 269 aaKnown RBP-0.96□□□□□ -2.56
snR55snR55 SKG1P36169 355 aa-0.96□□□□□ -2.56
snR55snR55 FIT1Q04433 528 aa-0.96□□□□□ -2.56
snR55snR55 YMR226CQ05016 267 aaKnown RBP-0.96□□□□□ -2.56
snR55snR55 TDA8Q6B2U8 126 aa-0.96□□□□□ -2.56
snR55snR55 YOL013W-AP0C272 63 aaPredicted RBP-0.97□□□□□ -2.56
snR55snR55 TMA23Q03525 211 aa-0.97□□□□□ -2.56
snR55snR55 YML108WQ03759 105 aa-0.97□□□□□ -2.56
snR55snR55 FYV12Q08559 129 aa-0.97□□□□□ -2.56
snR55snR55 YHR213W-BQ8TGK1 99 aa-0.97□□□□□ -2.56
snR55snR55 DRS2P39524 1355 aa-0.97□□□□□ -2.57
snR55snR55 TCP1P12612 559 aaKnown RBP-0.98□□□□□ -2.57
snR55snR55 MCM22P47167 239 aa-0.98□□□□□ -2.57
snR55snR55 VPS71Q03433 280 aa-0.98□□□□□ -2.57
snR55snR55 RNH202Q05635 350 aa-0.98□□□□□ -2.57
snR55snR55 PRP11Q07350 266 aaPredicted RBP-0.98□□□□□ -2.57
snR55snR55 SDO1Q07953 250 aaKnown RBP-0.98□□□□□ -2.57
snR55snR55 YLR307C-AQ3E825 87 aa-0.98□□□□□ -2.57
snR55snR55 YIL177CP40434 1758 aa-0.98□□□□□ -2.57
snR55snR55 YJL225CP40889 1758 aa-0.98□□□□□ -2.57
snR55snR55 YBR056W-AI2HB52 66 aa-0.99□□□□□ -2.57
snR55snR55 TVP23P38962 199 aa-0.99□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms