RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	UBC7	Q02159	165 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	MAK3	Q03503	176 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	TRM12	Q04235	462 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	HRI1	Q05905	244 aa	Known RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	PAM18	Q07914	168 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	DCI1	Q08558	271 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	SNX3	Q08826	162 aa	Known RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	FSF1	Q12029	327 aa	Known RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	YOR283W	Q12040	230 aa	Known RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	FCY22	Q12119	530 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	WTM1	Q12363	437 aa	Known RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	YPR1	Q12458	312 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	FOL3	Q12676	427 aa	Predicted RBP	3.2	□□□□□ -1.9
FDH2	YPL275W	FSH3	Q99369	266 aa		3.2	□□□□□ -1.9
FDH2	YPL275W	MEC1	P38111	2368 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	COX5B	P00425	151 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	CYC3	P06182	269 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	RPS8A	P0CX39	200 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	RPS8B	P0CX40	200 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	DPM1	P14020	267 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	SPO7	P18410	259 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	FUN14	P18411	198 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	PCL1	P24867	279 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	ERG9	P29704	444 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	NUP2	P32499	720 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
FDH2	YPL275W	PRP18	P33411	251 aa	Predicted RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	ECT1	P33412	323 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	SSS1	P35179	80 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	PRS3	P38689	320 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	IPI1	P38803	334 aa	Predicted RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	YHR122W	P38829	231 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	LCP5	P40079	357 aa	Predicted RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	YKE4	P40544	346 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	YIL012W	P40551	113 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	MRX5	P47007	382 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	SDT1	P53078	280 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	YNR066C	P53752	436 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	RPL22B	P56628	122 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	YDR366C	P87287	132 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	NUP49	Q02199	472 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	ABF2	Q02486	183 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	TMA23	Q03525	211 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	HPT1	Q04178	221 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	RIF2	Q06208	395 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	IPK1	Q06667	281 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	YFH1	Q07540	174 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	BSC6	Q08280	497 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	YDL199C	Q12407	687 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	PEX11	Q12462	236 aa		3.19	□□□□□ -1.9
FDH2	YPL275W	UTP20	P35194	2493 aa	Known RBP	3.19	□□□□□ -1.9
FDH2	YPL275W	HIS1	P00498	297 aa	Known RBP	3.18	□□□□□ -1.9
FDH2	YPL275W	YKR104W	P0CE69	306 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	ANB1	P19211	157 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	SAG1	P20840	650 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	SEC22	P22214	214 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	HOM6	P31116	359 aa	Known RBP	3.18	□□□□□ -1.9
FDH2	YPL275W	CYS4	P32582	507 aa	Known RBP	3.18	□□□□□ -1.9
FDH2	YPL275W	SEC17	P32602	292 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	DOG2	P38773	246 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	YHK8	P38776	514 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	YEA6	P39953	335 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	COG3	P40094	801 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	YMR144W	P40214	342 aa	Known RBP	3.18	□□□□□ -1.9
FDH2	YPL275W	PAN6	P40459	309 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	IRC18	P47056	224 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	PEX31	P53203	462 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	YNL260C	P53846	198 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	GIP3	Q03016	1276 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	BET5	Q03630	159 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	AIM34	Q03673	198 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	YLR179C	Q06252	201 aa	Known RBP	3.18	□□□□□ -1.9
FDH2	YPL275W	ASR1	Q06834	288 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	TFC7	Q12415	435 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	PRM4	Q12498	284 aa		3.18	□□□□□ -1.9
FDH2	YPL275W	VPS63	O13549	108 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	RAD6	P06104	172 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	CDC33	P07260	213 aa	Known RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	PUT1	P09368	476 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	YFR010W-A	P0C5N0	62 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	ARO3	P14843	370 aa	Known RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	ERD2	P18414	219 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	PPH21	P23594	369 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	MEK1	P24719	497 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	YCL068C	P25593	260 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	PDC2	P32896	925 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	QDR3	P38227	689 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	YPC1	P38298	316 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	MBA1	P38300	278 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	HIS2	P38635	335 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	YHL044W	P38727	235 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	OXA1	P39952	402 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	YER189W	P40104	122 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	CAK1	P43568	368 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	HOC1	P47124	396 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	EFM3	P47163	339 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	SNN1	P48232	102 aa		3.17	□□□□□ -1.9
FDH2	YPL275W	ASN2	P49090	572 aa	Known RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	RIB4	P50861	169 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH2	YPL275W	TPN1	P53099	579 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms