RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C CDC36P06100 191 aaPredicted RBP1.72□□□□□ -2.13
CUP9YPL177C YBR121C-AP0C5L4 52 aa1.72□□□□□ -2.13
CUP9YPL177C COQ1P18900 473 aa1.72□□□□□ -2.13
CUP9YPL177C CBT1P36038 271 aaPredicted RBP1.72□□□□□ -2.13
CUP9YPL177C PGD1P40356 397 aa1.72□□□□□ -2.13
CUP9YPL177C CGR1P53188 120 aa1.72□□□□□ -2.13
CUP9YPL177C SNZ1Q03148 297 aa1.72□□□□□ -2.13
CUP9YPL177C GAS3Q03655 524 aa1.72□□□□□ -2.13
CUP9YPL177C NCB2Q92317 146 aa1.72□□□□□ -2.13
CUP9YPL177C YBR219CP38317 127 aa1.71□□□□□ -2.14
CUP9YPL177C POP4P38336 279 aa1.71□□□□□ -2.14
CUP9YPL177C YNL194CP40169 301 aa1.71□□□□□ -2.14
CUP9YPL177C ICE2P40499 491 aa1.71□□□□□ -2.14
CUP9YPL177C YRB2P40517 327 aa1.71□□□□□ -2.14
CUP9YPL177C TIR3P40552 269 aa1.71□□□□□ -2.14
CUP9YPL177C YRB1P41920 201 aaKnown RBP1.71□□□□□ -2.14
CUP9YPL177C SML1Q04964 104 aa1.71□□□□□ -2.14
CUP9YPL177C CDC33P07260 213 aaKnown RBP1.7□□□□□ -2.14
CUP9YPL177C RPL27BP0C2H7 136 aaKnown RBP1.7□□□□□ -2.14
CUP9YPL177C SIP3P38717 1229 aa1.7□□□□□ -2.14
CUP9YPL177C SVP26P38869 228 aa1.7□□□□□ -2.14
CUP9YPL177C FAR7P43592 221 aa1.7□□□□□ -2.14
CUP9YPL177C ADO1P47143 340 aaKnown RBP1.7□□□□□ -2.14
CUP9YPL177C RAD17P48581 401 aa1.7□□□□□ -2.14
CUP9YPL177C MGA1P53050 456 aa1.7□□□□□ -2.14
CUP9YPL177C BOL2P53082 120 aa1.7□□□□□ -2.14
CUP9YPL177C PRM8P53174 237 aa1.7□□□□□ -2.14
CUP9YPL177C BNA7Q04066 261 aa1.7□□□□□ -2.14
CUP9YPL177C YDR157WA0A023PZE8 133 aa1.69□□□□□ -2.14
CUP9YPL177C STE18P18852 110 aa1.69□□□□□ -2.14
CUP9YPL177C MRPS28P21771 286 aa1.69□□□□□ -2.14
CUP9YPL177C PRP18P33411 251 aaPredicted RBP1.69□□□□□ -2.14
CUP9YPL177C APS1P35181 156 aa1.69□□□□□ -2.14
CUP9YPL177C AVT2P39981 480 aa1.69□□□□□ -2.14
CUP9YPL177C BUD25P85052 153 aa1.69□□□□□ -2.14
CUP9YPL177C MRPS17Q03246 237 aaPredicted RBP1.69□□□□□ -2.14
CUP9YPL177C JLP1Q12358 412 aa1.69□□□□□ -2.14
CUP9YPL177C FLO9P39712 1322 aa1.68□□□□□ -2.14
CUP9YPL177C YOL162WP0CF19 215 aa1.68□□□□□ -2.14
CUP9YPL177C TCA17P32613 152 aa1.68□□□□□ -2.14
CUP9YPL177C YKR045CP36138 183 aa1.68□□□□□ -2.14
CUP9YPL177C UTP30P36144 274 aaKnown RBP1.68□□□□□ -2.14
CUP9YPL177C MRPL28P36527 147 aa1.68□□□□□ -2.14
CUP9YPL177C YER135CP40082 130 aa1.68□□□□□ -2.14
CUP9YPL177C YNL217WP40152 326 aa1.68□□□□□ -2.14
CUP9YPL177C CWC23P52868 283 aaPredicted RBP1.68□□□□□ -2.14
CUP9YPL177C DOC1P53068 250 aa1.68□□□□□ -2.14
CUP9YPL177C YNR077CP53758 84 aa1.68□□□□□ -2.14
CUP9YPL177C YMR226CQ05016 267 aaKnown RBP1.68□□□□□ -2.14
CUP9YPL177C CSI2Q08054 341 aa1.68□□□□□ -2.14
CUP9YPL177C SEC17P32602 292 aa1.67□□□□□ -2.14
CUP9YPL177C FZF1P32805 299 aa1.67□□□□□ -2.14
CUP9YPL177C PRX1P34227 261 aaKnown RBP1.67□□□□□ -2.14
CUP9YPL177C CUS2P53830 285 aaPredicted RBP1.67□□□□□ -2.14
CUP9YPL177C SWP1Q02795 286 aa1.67□□□□□ -2.14
CUP9YPL177C MCP1Q12106 302 aa1.67□□□□□ -2.14
CUP9YPL177C GET4Q12125 312 aa1.67□□□□□ -2.14
CUP9YPL177C YHR214C-EQ8TGK0 99 aa1.67□□□□□ -2.14
CUP9YPL177C PDR18P53756 1333 aa1.66□□□□□ -2.14
CUP9YPL177C TIM9O74700 87 aa1.66□□□□□ -2.14
CUP9YPL177C GCN3P14741 305 aa1.66□□□□□ -2.14
CUP9YPL177C TAF14P35189 244 aa1.66□□□□□ -2.14
CUP9YPL177C MRPL17P36528 281 aa1.66□□□□□ -2.14
CUP9YPL177C GLE2P40066 365 aa1.66□□□□□ -2.14
CUP9YPL177C RFC4P40339 323 aaKnown RBP1.66□□□□□ -2.14
CUP9YPL177C PET191Q02772 108 aa1.66□□□□□ -2.14
CUP9YPL177C TLG1Q03322 224 aa1.66□□□□□ -2.14
CUP9YPL177C SKG1P36169 355 aa1.65□□□□□ -2.15
CUP9YPL177C PDR17P53844 350 aa1.65□□□□□ -2.15
CUP9YPL177C GIM3P53900 129 aa1.65□□□□□ -2.15
CUP9YPL177C ATG38Q05789 226 aaKnown RBP1.65□□□□□ -2.15
CUP9YPL177C YLR162WQ06235 118 aa1.65□□□□□ -2.15
CUP9YPL177C YPL162CQ12042 273 aa1.65□□□□□ -2.15
CUP9YPL177C YRA1Q12159 226 aaKnown RBP1.65□□□□□ -2.15
CUP9YPL177C TSC3Q3E790 80 aa1.65□□□□□ -2.15
CUP9YPL177C TUS1Q06412 1307 aa1.65□□□□□ -2.15
CUP9YPL177C CHD1P32657 1468 aa1.64□□□□□ -2.15
CUP9YPL177C MATALPHA2P0CY08 210 aa1.64□□□□□ -2.15
CUP9YPL177C HMLALPHA2P0CY09 210 aa1.64□□□□□ -2.15
CUP9YPL177C YPK2P18961 677 aa1.64□□□□□ -2.15
CUP9YPL177C RFA3P26755 122 aaKnown RBP1.64□□□□□ -2.15
CUP9YPL177C IDH1P28834 360 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
CUP9YPL177C SPS18P32572 300 aa1.64□□□□□ -2.15
CUP9YPL177C MGM101P32787 269 aaKnown RBP1.64□□□□□ -2.15
CUP9YPL177C PTM1P32857 523 aa1.64□□□□□ -2.15
CUP9YPL177C YET1P35723 206 aa1.64□□□□□ -2.15
CUP9YPL177C UMP1P38293 148 aa1.64□□□□□ -2.15
CUP9YPL177C IKI1P38874 309 aa1.64□□□□□ -2.15
CUP9YPL177C RMD6P39975 231 aa1.64□□□□□ -2.15
CUP9YPL177C IRC18P47056 224 aa1.64□□□□□ -2.15
CUP9YPL177C EAF6P47128 113 aa1.64□□□□□ -2.15
CUP9YPL177C YGR050CP53231 118 aa1.64□□□□□ -2.15
CUP9YPL177C ABP140Q08641 628 aaKnown RBP1.64□□□□□ -2.15
CUP9YPL177C SAC3P46674 1301 aa1.64□□□□□ -2.15
CUP9YPL177C HTB1P02293 131 aaKnown RBP1.63□□□□□ -2.15
CUP9YPL177C HTB2P02294 131 aa1.63□□□□□ -2.15
CUP9YPL177C SEC4P07560 215 aaKnown RBP1.63□□□□□ -2.15
CUP9YPL177C CBF1P17106 351 aa1.63□□□□□ -2.15
CUP9YPL177C GAA1P39012 614 aa1.63□□□□□ -2.15
CUP9YPL177C YCL012CQ8J0M4 134 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms