RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W PRP18P33411 251 aaPredicted RBP1.54□□□□□ -2.16
SWM2YNR004W PRX1P34227 261 aaKnown RBP1.54□□□□□ -2.16
SWM2YNR004W ECM4P36156 370 aa1.54□□□□□ -2.16
SWM2YNR004W YBR209WP38311 105 aa1.54□□□□□ -2.16
SWM2YNR004W CTR2P38865 189 aa1.54□□□□□ -2.16
SWM2YNR004W IKI1P38874 309 aa1.54□□□□□ -2.16
SWM2YNR004W BMT5P40493 336 aa1.54□□□□□ -2.16
SWM2YNR004W RPL33BP41056 107 aaKnown RBP1.54□□□□□ -2.16
SWM2YNR004W BAT2P47176 376 aaKnown RBP1.54□□□□□ -2.16
SWM2YNR004W SAY1P53324 424 aa1.54□□□□□ -2.16
SWM2YNR004W SWP1Q02795 286 aa1.54□□□□□ -2.16
SWM2YNR004W MSA1Q08471 629 aa1.54□□□□□ -2.16
SWM2YNR004W ABP140Q08641 628 aaKnown RBP1.54□□□□□ -2.16
SWM2YNR004W CFT1Q06632 1357 aaKnown RBP1.54□□□□□ -2.16
SWM2YNR004W DDI2P0CH63 225 aa1.53□□□□□ -2.16
SWM2YNR004W DDI3P0CH64 225 aa1.53□□□□□ -2.16
SWM2YNR004W IDH1P28834 360 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
SWM2YNR004W TMA19P35691 167 aaKnown RBP1.53□□□□□ -2.16
SWM2YNR004W AVT2P39981 480 aa1.53□□□□□ -2.16
SWM2YNR004W ERG28P40030 148 aa1.53□□□□□ -2.16
SWM2YNR004W YNL217WP40152 326 aa1.53□□□□□ -2.16
SWM2YNR004W PRM10P42946 383 aa1.53□□□□□ -2.16
SWM2YNR004W AIF1P52923 378 aa1.53□□□□□ -2.16
SWM2YNR004W GPM2Q12008 311 aa1.53□□□□□ -2.16
SWM2YNR004W CDC7P06243 507 aa1.52□□□□□ -2.17
SWM2YNR004W YPR170W-BP0C5R9 85 aa1.52□□□□□ -2.17
SWM2YNR004W YLR156WP0CE96 114 aa1.52□□□□□ -2.17
SWM2YNR004W YLR159WP0CE97 114 aa1.52□□□□□ -2.17
SWM2YNR004W YLR161WP0CE98 114 aa1.52□□□□□ -2.17
SWM2YNR004W KSS1P14681 368 aa1.52□□□□□ -2.17
SWM2YNR004W BET1P22804 142 aa1.52□□□□□ -2.17
SWM2YNR004W TCA17P32613 152 aa1.52□□□□□ -2.17
SWM2YNR004W SRY1P36007 326 aa1.52□□□□□ -2.17
SWM2YNR004W YKT6P36015 200 aaKnown RBP1.52□□□□□ -2.17
SWM2YNR004W AST2P39945 430 aaKnown RBP1.52□□□□□ -2.17
SWM2YNR004W FCY21P40039 528 aa1.52□□□□□ -2.17
SWM2YNR004W YER135CP40082 130 aa1.52□□□□□ -2.17
SWM2YNR004W COG5P53951 403 aa1.52□□□□□ -2.17
SWM2YNR004W MZM1Q03429 123 aaPredicted RBP1.52□□□□□ -2.17
SWM2YNR004W FUS2Q05670 677 aa1.52□□□□□ -2.17
SWM2YNR004W GGA1Q06336 557 aa1.52□□□□□ -2.17
SWM2YNR004W FSF1Q12029 327 aaKnown RBP1.52□□□□□ -2.17
SWM2YNR004W YKL183C-AQ3E765 70 aa1.52□□□□□ -2.17
SWM2YNR004W TDA8Q6B2U8 126 aa1.52□□□□□ -2.17
SWM2YNR004W YPL229WQ99395 206 aa1.52□□□□□ -2.17
SWM2YNR004W SEC4P07560 215 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W CKS1P20486 150 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W YBR285WP38354 144 aa1.51□□□□□ -2.17
SWM2YNR004W YHR180WP38868 163 aa1.51□□□□□ -2.17
SWM2YNR004W RFC4P40339 323 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W GVP36P40531 326 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W YJL027CP47063 138 aaPredicted RBP1.51□□□□□ -2.17
SWM2YNR004W ADO1P47143 340 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W CUS2P53830 285 aaPredicted RBP1.51□□□□□ -2.17
SWM2YNR004W LSM7P53905 115 aaKnown RBP1.51□□□□□ -2.17
SWM2YNR004W TIM11P81449 96 aaPredicted RBP1.51□□□□□ -2.17
SWM2YNR004W CYT2Q00873 224 aa1.51□□□□□ -2.17
SWM2YNR004W RAS2P01120 322 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W CDC33P07260 213 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W RPL27AP0C2H6 136 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W RPL27BP0C2H7 136 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W MRPL17P36528 281 aa1.5□□□□□ -2.17
SWM2YNR004W YCR087C-AP37263 153 aa1.5□□□□□ -2.17
SWM2YNR004W RTC3P38804 111 aaPredicted RBP1.5□□□□□ -2.17
SWM2YNR004W AIM2P39721 246 aa1.5□□□□□ -2.17
SWM2YNR004W HMF1P40037 129 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W AGE2P40529 298 aa1.5□□□□□ -2.17
SWM2YNR004W DOC1P53068 250 aa1.5□□□□□ -2.17
SWM2YNR004W ALG13P53178 202 aa1.5□□□□□ -2.17
SWM2YNR004W GET1P53192 235 aa1.5□□□□□ -2.17
SWM2YNR004W YDL085C-AQ3E7B7 68 aaKnown RBP1.5□□□□□ -2.17
SWM2YNR004W TIM9O74700 87 aa1.49□□□□□ -2.17
SWM2YNR004W RPB3P16370 318 aaKnown RBP1.49□□□□□ -2.17
SWM2YNR004W SEC17P32602 292 aa1.49□□□□□ -2.17
SWM2YNR004W CBT1P36038 271 aaPredicted RBP1.49□□□□□ -2.17
SWM2YNR004W SIP3P38717 1229 aa1.49□□□□□ -2.17
SWM2YNR004W YRB2P40517 327 aa1.49□□□□□ -2.17
SWM2YNR004W YFR054CP43622 192 aa1.49□□□□□ -2.17
SWM2YNR004W YGR050CP53231 118 aa1.49□□□□□ -2.17
SWM2YNR004W YDR249CQ03787 373 aa1.49□□□□□ -2.17
SWM2YNR004W DYN3Q04949 312 aa1.49□□□□□ -2.17
SWM2YNR004W SML1Q04964 104 aa1.49□□□□□ -2.17
SWM2YNR004W ANT1Q06497 328 aa1.49□□□□□ -2.17
SWM2YNR004W YLR031WQ07978 186 aa1.49□□□□□ -2.17
SWM2YNR004W GET4Q12125 312 aa1.49□□□□□ -2.17
SWM2YNR004W RIO1Q12196 484 aaKnown RBP1.49□□□□□ -2.17
SWM2YNR004W YHR086W-AQ3E746 53 aa1.49□□□□□ -2.17
SWM2YNR004W ATG40Q99325 256 aa1.49□□□□□ -2.17
SWM2YNR004W YOL162WP0CF19 215 aa1.48□□□□□ -2.17
SWM2YNR004W YGL010WP25338 174 aa1.48□□□□□ -2.17
SWM2YNR004W YNL194CP40169 301 aa1.48□□□□□ -2.17
SWM2YNR004W YRA1Q12159 226 aaKnown RBP1.48□□□□□ -2.17
SWM2YNR004W YDL180WQ12301 547 aa1.48□□□□□ -2.17
SWM2YNR004W ADF1Q2V2Q1 113 aa1.48□□□□□ -2.17
SWM2YNR004W YHR139C-AO13536 103 aa1.47□□□□□ -2.17
SWM2YNR004W HTB1P02293 131 aaKnown RBP1.47□□□□□ -2.17
SWM2YNR004W HTB2P02294 131 aa1.47□□□□□ -2.17
SWM2YNR004W CNB1P25296 175 aa1.47□□□□□ -2.17
SWM2YNR004W YCR090CP25654 182 aaKnown RBP1.47□□□□□ -2.17
SWM2YNR004W FZF1P32805 299 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 196.1 ms