RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W IKI3Q06706 1349 aaKnown RBP1.74□□□□□ -2.13
SRP1YNL189W CDC8P00572 216 aa1.74□□□□□ -2.13
SRP1YNL189W STE18P18852 110 aa1.74□□□□□ -2.13
SRP1YNL189W PHO88P38264 188 aaPredicted RBP1.74□□□□□ -2.13
SRP1YNL189W DOG2P38773 246 aa1.74□□□□□ -2.13
SRP1YNL189W YRB1P41920 201 aaKnown RBP1.74□□□□□ -2.13
SRP1YNL189W NUP57P48837 541 aa1.74□□□□□ -2.13
SRP1YNL189W BRR6P53062 197 aa1.74□□□□□ -2.13
SRP1YNL189W EFM5P53200 248 aaKnown RBP1.74□□□□□ -2.13
SRP1YNL189W YNL010WP53981 241 aaKnown RBP1.74□□□□□ -2.13
SRP1YNL189W DAD3P69850 94 aa1.74□□□□□ -2.13
SRP1YNL189W LPP1Q04396 274 aa1.74□□□□□ -2.13
SRP1YNL189W DCN1Q12395 269 aa1.74□□□□□ -2.13
SRP1YNL189W NCB2Q92317 146 aa1.74□□□□□ -2.13
SRP1YNL189W FBA1P14540 359 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W CBF1P17106 351 aa1.73□□□□□ -2.13
SRP1YNL189W ECM4P36156 370 aa1.73□□□□□ -2.13
SRP1YNL189W YHR022CP38763 256 aa1.73□□□□□ -2.13
SRP1YNL189W RFC4P40339 323 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W YRB2P40517 327 aa1.73□□□□□ -2.13
SRP1YNL189W ADO1P47143 340 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W YNR062CP53748 327 aa1.73□□□□□ -2.13
SRP1YNL189W YNL247WP53852 767 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W RAD9P14737 1309 aa1.73□□□□□ -2.13
SRP1YNL189W HTB1P02293 131 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W HTB2P02294 131 aa1.73□□□□□ -2.13
SRP1YNL189W SSO1P32867 290 aa1.73□□□□□ -2.13
SRP1YNL189W KDX1P36005 433 aa1.73□□□□□ -2.13
SRP1YNL189W ERV15P38312 142 aa1.73□□□□□ -2.13
SRP1YNL189W AYR1P40471 297 aa1.73□□□□□ -2.13
SRP1YNL189W ERG10P41338 398 aaKnown RBP1.73□□□□□ -2.13
SRP1YNL189W BXI1P48558 297 aa1.73□□□□□ -2.13
SRP1YNL189W GAS3Q03655 524 aa1.73□□□□□ -2.13
SRP1YNL189W YMD8Q03697 442 aa1.73□□□□□ -2.13
SRP1YNL189W YDR248CQ03786 193 aa1.73□□□□□ -2.13
SRP1YNL189W TDA8Q6B2U8 126 aa1.73□□□□□ -2.13
SRP1YNL189W REP2P03872 296 aa1.72□□□□□ -2.13
SRP1YNL189W YLR156WP0CE96 114 aa1.72□□□□□ -2.13
SRP1YNL189W YLR159WP0CE97 114 aa1.72□□□□□ -2.13
SRP1YNL189W YLR161WP0CE98 114 aa1.72□□□□□ -2.13
SRP1YNL189W IKI1P38874 309 aa1.72□□□□□ -2.13
SRP1YNL189W BAT2P47176 376 aaKnown RBP1.72□□□□□ -2.13
SRP1YNL189W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SRP1YNL189W YRA1Q12159 226 aaKnown RBP1.72□□□□□ -2.13
SRP1YNL189W DDI2P0CH63 225 aa1.71□□□□□ -2.14
SRP1YNL189W DDI3P0CH64 225 aa1.71□□□□□ -2.14
SRP1YNL189W ATG22P25568 528 aa1.71□□□□□ -2.14
SRP1YNL189W BMT5P40493 336 aa1.71□□□□□ -2.14
SRP1YNL189W PET191Q02772 108 aa1.71□□□□□ -2.14
SRP1YNL189W RPL35AP0CX84 120 aaKnown RBP1.7□□□□□ -2.14
SRP1YNL189W RPL35BP0CX85 120 aaKnown RBP1.7□□□□□ -2.14
SRP1YNL189W PET9P18239 318 aaKnown RBP1.7□□□□□ -2.14
SRP1YNL189W SPS18P32572 300 aa1.7□□□□□ -2.14
SRP1YNL189W YKE4P40544 346 aa1.7□□□□□ -2.14
SRP1YNL189W DID2P69771 204 aa1.7□□□□□ -2.14
SRP1YNL189W JLP1Q12358 412 aa1.7□□□□□ -2.14
SRP1YNL189W LSO2Q3E772 92 aaKnown RBP1.7□□□□□ -2.14
SRP1YNL189W BOL1Q3E793 110 aa1.7□□□□□ -2.14
SRP1YNL189W TCA17P32613 152 aa1.69□□□□□ -2.14
SRP1YNL189W APS1P35181 156 aa1.69□□□□□ -2.14
SRP1YNL189W POP4P38336 279 aa1.69□□□□□ -2.14
SRP1YNL189W FAR7P43592 221 aa1.69□□□□□ -2.14
SRP1YNL189W YFR054CP43622 192 aa1.69□□□□□ -2.14
SRP1YNL189W AIF1P52923 378 aa1.69□□□□□ -2.14
SRP1YNL189W GET1P53192 235 aa1.69□□□□□ -2.14
SRP1YNL189W YMR226CQ05016 267 aaKnown RBP1.69□□□□□ -2.14
SRP1YNL189W FUS2Q05670 677 aa1.69□□□□□ -2.14
SRP1YNL189W YHR214C-EQ8TGK0 99 aa1.69□□□□□ -2.14
SRP1YNL189W CDC7P06243 507 aa1.69□□□□□ -2.14
SRP1YNL189W MEI4P29467 408 aa1.69□□□□□ -2.14
SRP1YNL189W SEC17P32602 292 aa1.69□□□□□ -2.14
SRP1YNL189W UTP30P36144 274 aaKnown RBP1.69□□□□□ -2.14
SRP1YNL189W RSM25P40496 264 aa1.69□□□□□ -2.14
SRP1YNL189W AGE2P40529 298 aa1.69□□□□□ -2.14
SRP1YNL189W RPL33BP41056 107 aaKnown RBP1.69□□□□□ -2.14
SRP1YNL189W RTC4P53850 401 aa1.69□□□□□ -2.14
SRP1YNL189W RRP17Q04031 235 aaPredicted RBP1.69□□□□□ -2.14
SRP1YNL189W GGA1Q06336 557 aa1.69□□□□□ -2.14
SRP1YNL189W USB1Q12208 290 aaKnown RBP1.69□□□□□ -2.14
SRP1YNL189W CMC2Q3E7A4 109 aa1.69□□□□□ -2.14
SRP1YNL189W SEC4P07560 215 aaKnown RBP1.68□□□□□ -2.14
SRP1YNL189W IDH1P28834 360 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SRP1YNL189W YCR087C-AP37263 153 aa1.68□□□□□ -2.14
SRP1YNL189W PEP8P40335 379 aa1.68□□□□□ -2.14
SRP1YNL189W ERG25P53045 309 aa1.68□□□□□ -2.14
SRP1YNL189W PRM8P53174 237 aa1.68□□□□□ -2.14
SRP1YNL189W PDR17P53844 350 aa1.68□□□□□ -2.14
SRP1YNL189W MCP1Q12106 302 aa1.68□□□□□ -2.14
SRP1YNL189W RPL27AP0C2H6 136 aaKnown RBP1.67□□□□□ -2.14
SRP1YNL189W RPL27BP0C2H7 136 aaKnown RBP1.67□□□□□ -2.14
SRP1YNL189W PGD1P40356 397 aa1.67□□□□□ -2.14
SRP1YNL189W BOL2P53082 120 aa1.67□□□□□ -2.14
SRP1YNL189W YIP3P53633 176 aa1.67□□□□□ -2.14
SRP1YNL189W YNR077CP53758 84 aa1.67□□□□□ -2.14
SRP1YNL189W GIM5Q04493 163 aa1.67□□□□□ -2.14
SRP1YNL189W GCN3P14741 305 aa1.66□□□□□ -2.14
SRP1YNL189W ATP7P30902 174 aa1.66□□□□□ -2.14
SRP1YNL189W ACP1P32463 125 aa1.66□□□□□ -2.14
SRP1YNL189W EGD2P38879 174 aaKnown RBP1.66□□□□□ -2.14
SRP1YNL189W YML108WQ03759 105 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms