RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A TRM12Q04235 462 aa3.04□□□□□ -1.92
YNL054W-AYNL054W-A VPS68Q12016 184 aa3.04□□□□□ -1.92
YNL054W-AYNL054W-A UTP30P36144 274 aaKnown RBP3.03□□□□□ -1.92
YNL054W-AYNL054W-A COG5P53951 403 aa3.03□□□□□ -1.92
YNL054W-AYNL054W-A YHR214C-EQ8TGK0 99 aa3.03□□□□□ -1.92
YNL054W-AYNL054W-A QCR6P00127 147 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A MRS1P07266 363 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A ATG22P25568 528 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A PTM1P32857 523 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A YHL026CP38740 315 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A EGD2P38879 174 aaKnown RBP3.02□□□□□ -1.93
YNL054W-AYNL054W-A YIL001WP40560 513 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A ERG10P41338 398 aaKnown RBP3.02□□□□□ -1.93
YNL054W-AYNL054W-A HOP2P53187 214 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A GAS3Q03655 524 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A ARO80Q04052 950 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A ARR2Q06597 130 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A GPM2Q12008 311 aa3.02□□□□□ -1.93
YNL054W-AYNL054W-A CDC8P00572 216 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A YLR156WP0CE96 114 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A YLR159WP0CE97 114 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A YLR161WP0CE98 114 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A COS6P53344 381 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A RDS3Q06835 107 aaPredicted RBP3.01□□□□□ -1.93
YNL054W-AYNL054W-A GRE1Q08969 168 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A MCP1Q12106 302 aa3.01□□□□□ -1.93
YNL054W-AYNL054W-A YPR096CO13587 100 aa3□□□□□ -1.93
YNL054W-AYNL054W-A CLB6P32943 380 aa3□□□□□ -1.93
YNL054W-AYNL054W-A PRM10P42946 383 aa3□□□□□ -1.93
YNL054W-AYNL054W-A SNX4P47057 423 aa3□□□□□ -1.93
YNL054W-AYNL054W-A YOL160WQ08321 113 aa3□□□□□ -1.93
YNL054W-AYNL054W-A MDM32Q12171 622 aa3□□□□□ -1.93
YNL054W-AYNL054W-A MAG1P22134 296 aaKnown RBP2.99□□□□□ -1.93
YNL054W-AYNL054W-A RMD6P39975 231 aa2.99□□□□□ -1.93
YNL054W-AYNL054W-A AIM25P47140 327 aa2.99□□□□□ -1.93
YNL054W-AYNL054W-A SLM2P53955 656 aa2.99□□□□□ -1.93
YNL054W-AYNL054W-A YDR249CQ03787 373 aa2.99□□□□□ -1.93
YNL054W-AYNL054W-A YPL162CQ12042 273 aa2.99□□□□□ -1.93
YNL054W-AYNL054W-A FKS1P38631 1876 aaKnown RBP2.99□□□□□ -1.93
YNL054W-AYNL054W-A RPL25P04456 142 aaKnown RBP2.98□□□□□ -1.93
YNL054W-AYNL054W-A MED6P38782 295 aa2.98□□□□□ -1.93
YNL054W-AYNL054W-A YHR180WP38868 163 aa2.98□□□□□ -1.93
YNL054W-AYNL054W-A SEC72P39742 193 aaKnown RBP2.98□□□□□ -1.93
YNL054W-AYNL054W-A POG1P40473 351 aa2.98□□□□□ -1.93
YNL054W-AYNL054W-A PUT1P09368 476 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A RPL35AP0CX84 120 aaKnown RBP2.97□□□□□ -1.93
YNL054W-AYNL054W-A RPL35BP0CX85 120 aaKnown RBP2.97□□□□□ -1.93
YNL054W-AYNL054W-A KSS1P14681 368 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A CNB1P25296 175 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A VMA11P32842 164 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A SHG1P38337 142 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A HMF1P40037 129 aaKnown RBP2.97□□□□□ -1.93
YNL054W-AYNL054W-A MNN5P46982 586 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A UBC12P52491 188 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A GIM5Q04493 163 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A SUE1Q06524 206 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A YFR032C-BQ8TGU2 87 aa2.97□□□□□ -1.93
YNL054W-AYNL054W-A MSW1P04803 379 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A AST2P39945 430 aaKnown RBP2.96□□□□□ -1.93
YNL054W-AYNL054W-A DSK2P48510 373 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A YNL184CP53876 108 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A SWP1Q02795 286 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A SNO1Q03144 224 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A MIX17Q03667 156 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A NEJ1Q06148 342 aa2.96□□□□□ -1.93
YNL054W-AYNL054W-A IKI3Q06706 1349 aaKnown RBP2.96□□□□□ -1.94
YNL054W-AYNL054W-A SIR2P06700 562 aa2.95□□□□□ -1.94
YNL054W-AYNL054W-A RPB3P16370 318 aaKnown RBP2.95□□□□□ -1.94
YNL054W-AYNL054W-A YIP3P53633 176 aa2.95□□□□□ -1.94
YNL054W-AYNL054W-A NRK1P53915 240 aa2.95□□□□□ -1.94
YNL054W-AYNL054W-A SPG3Q04398 127 aaPredicted RBP2.95□□□□□ -1.94
YNL054W-AYNL054W-A NOC4Q06512 552 aaPredicted RBP2.95□□□□□ -1.94
YNL054W-AYNL054W-A RME1P32338 300 aaKnown RBP2.94□□□□□ -1.94
YNL054W-AYNL054W-A CAF4P36130 643 aa2.94□□□□□ -1.94
YNL054W-AYNL054W-A ICE2P40499 491 aa2.94□□□□□ -1.94
YNL054W-AYNL054W-A RTC4P53850 401 aa2.94□□□□□ -1.94
YNL054W-AYNL054W-A SMD2Q06217 110 aaKnown RBP2.94□□□□□ -1.94
YNL054W-AYNL054W-A YET3Q07451 203 aa2.94□□□□□ -1.94
YNL054W-AYNL054W-A PET9P18239 318 aaKnown RBP2.93□□□□□ -1.94
YNL054W-AYNL054W-A SNF6P18888 332 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A RAD51P25454 400 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A TAH1P25638 111 aaPredicted RBP2.93□□□□□ -1.94
YNL054W-AYNL054W-A MEI4P29467 408 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A YOR062CP36025 268 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A ECM4P36156 370 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A MRPL17P36528 281 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A AIF1P52923 378 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A JAC1P53193 184 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A GRX8Q05926 109 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A EMC6Q12431 108 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A MHT1Q12525 324 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A IGO2Q9P305 131 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A MBF1O14467 151 aaKnown RBP2.93□□□□□ -1.94
YNL054W-AYNL054W-A TIM9O74700 87 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
YNL054W-AYNL054W-A ATP15P21306 62 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A BET1P22804 142 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A UTR5P32630 166 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A YKR041WP36134 250 aa2.93□□□□□ -1.94
YNL054W-AYNL054W-A SKG1P36169 355 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms