RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W RDL2Q08742 149 aaKnown RBP2.75□□□□□ -1.97
CSM3YMR048W GRE1Q08969 168 aa2.75□□□□□ -1.97
CSM3YMR048W GPI12P23797 304 aa2.74□□□□□ -1.97
CSM3YMR048W STP22P25604 385 aa2.74□□□□□ -1.97
CSM3YMR048W HSP30P25619 332 aa2.74□□□□□ -1.97
CSM3YMR048W AHC2P25649 128 aa2.74□□□□□ -1.97
CSM3YMR048W OAC1P32332 324 aa2.74□□□□□ -1.97
CSM3YMR048W LHP1P33399 275 aaKnown RBP2.74□□□□□ -1.97
CSM3YMR048W YHR035WP38769 630 aa2.74□□□□□ -1.97
CSM3YMR048W EGD2P38879 174 aaKnown RBP2.74□□□□□ -1.97
CSM3YMR048W SOP4P39543 234 aaPredicted RBP2.74□□□□□ -1.97
CSM3YMR048W YRB2P40517 327 aa2.74□□□□□ -1.97
CSM3YMR048W TPC1P53257 314 aa2.74□□□□□ -1.97
CSM3YMR048W VOA1P53262 265 aa2.74□□□□□ -1.97
CSM3YMR048W MPP6P53725 186 aaPredicted RBP2.74□□□□□ -1.97
CSM3YMR048W PET191Q02772 108 aa2.74□□□□□ -1.97
CSM3YMR048W DIG2Q03373 323 aaKnown RBP2.74□□□□□ -1.97
CSM3YMR048W DML1Q03652 475 aa2.74□□□□□ -1.97
CSM3YMR048W INP1Q03694 420 aa2.74□□□□□ -1.97
CSM3YMR048W GAL83Q04739 417 aa2.74□□□□□ -1.97
CSM3YMR048W YMR315WQ04869 349 aaKnown RBP2.74□□□□□ -1.97
CSM3YMR048W MRX8Q05473 314 aa2.74□□□□□ -1.97
CSM3YMR048W ARV1Q06541 321 aa2.74□□□□□ -1.97
CSM3YMR048W NIP7Q08962 181 aaKnown RBP2.74□□□□□ -1.97
CSM3YMR048W YOR289WQ12012 251 aaPredicted RBP2.74□□□□□ -1.97
CSM3YMR048W SIA1Q12212 622 aa2.74□□□□□ -1.97
CSM3YMR048W IES3Q12345 250 aa2.74□□□□□ -1.97
CSM3YMR048W TIM9O74700 87 aa2.73□□□□□ -1.97
CSM3YMR048W YFR010W-AP0C5N0 62 aa2.73□□□□□ -1.97
CSM3YMR048W YOL162WP0CF19 215 aa2.73□□□□□ -1.97
CSM3YMR048W ERD2P18414 219 aa2.73□□□□□ -1.97
CSM3YMR048W RAD51P25454 400 aa2.73□□□□□ -1.97
CSM3YMR048W TIM12P32830 109 aa2.73□□□□□ -1.97
CSM3YMR048W UTP11P34247 250 aaPredicted RBP2.73□□□□□ -1.97
CSM3YMR048W SRP102P36057 244 aaPredicted RBP2.73□□□□□ -1.97
CSM3YMR048W ECM4P36156 370 aa2.73□□□□□ -1.97
CSM3YMR048W AST2P39945 430 aaKnown RBP2.73□□□□□ -1.97
CSM3YMR048W PRE6P40303 254 aaKnown RBP2.73□□□□□ -1.97
CSM3YMR048W CCC1P47818 322 aa2.73□□□□□ -1.97
CSM3YMR048W GIM3P53900 129 aa2.73□□□□□ -1.97
CSM3YMR048W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
CSM3YMR048W RRP17Q04031 235 aaPredicted RBP2.73□□□□□ -1.97
CSM3YMR048W SNX41Q04053 625 aa2.73□□□□□ -1.97
CSM3YMR048W PBP4Q07362 185 aaKnown RBP2.73□□□□□ -1.97
CSM3YMR048W STT4P37297 1900 aa2.73□□□□□ -1.97
CSM3YMR048W SAL1D6W196 494 aa2.72□□□□□ -1.97
CSM3YMR048W RHO1P06780 209 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W SAR1P20606 190 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W INO2P26798 304 aa2.72□□□□□ -1.97
CSM3YMR048W CAM1P29547 415 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W RAD23P32628 398 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W YKL162CP36052 402 aa2.72□□□□□ -1.97
CSM3YMR048W YMR262WP38430 313 aa2.72□□□□□ -1.97
CSM3YMR048W YHR180WP38868 163 aa2.72□□□□□ -1.97
CSM3YMR048W NVJ1P38881 321 aa2.72□□□□□ -1.97
CSM3YMR048W KRE29P40026 464 aa2.72□□□□□ -1.97
CSM3YMR048W RIB4P50861 169 aaPredicted RBP2.72□□□□□ -1.97
CSM3YMR048W FMP48P53233 369 aa2.72□□□□□ -1.97
CSM3YMR048W SNZ1Q03148 297 aa2.72□□□□□ -1.97
CSM3YMR048W YDR209CQ03480 137 aa2.72□□□□□ -1.97
CSM3YMR048W YPR147CQ06522 304 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W PST2Q12335 198 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W UTP23Q12339 254 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W PAA1Q12447 191 aaKnown RBP2.72□□□□□ -1.97
CSM3YMR048W PRM4Q12498 284 aa2.72□□□□□ -1.97
CSM3YMR048W YPL119C-AQ3E751 87 aa2.72□□□□□ -1.97
CSM3YMR048W COX9P07255 59 aa2.71□□□□□ -1.98
CSM3YMR048W MET2P08465 486 aa2.71□□□□□ -1.98
CSM3YMR048W MRPL20P22354 195 aaPredicted RBP2.71□□□□□ -1.98
CSM3YMR048W TCA17P32613 152 aa2.71□□□□□ -1.98
CSM3YMR048W SHE2P36068 246 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
CSM3YMR048W MRPL39P36533 70 aa2.71□□□□□ -1.98
CSM3YMR048W SMB1P40018 196 aaKnown RBP2.71□□□□□ -1.98
CSM3YMR048W ECO1P43605 281 aa2.71□□□□□ -1.98
CSM3YMR048W BNA6P43619 295 aa2.71□□□□□ -1.98
CSM3YMR048W RPN14P53196 417 aa2.71□□□□□ -1.98
CSM3YMR048W NUP49Q02199 472 aa2.71□□□□□ -1.98
CSM3YMR048W SDC1Q03323 175 aa2.71□□□□□ -1.98
CSM3YMR048W YMR244WQ04018 355 aa2.71□□□□□ -1.98
CSM3YMR048W ELP6Q04868 273 aa2.71□□□□□ -1.98
CSM3YMR048W GPN3Q06543 272 aa2.71□□□□□ -1.98
CSM3YMR048W SPC3Q12133 184 aa2.71□□□□□ -1.98
CSM3YMR048W MSH5Q12175 901 aa2.71□□□□□ -1.98
CSM3YMR048W TFC7Q12415 435 aa2.71□□□□□ -1.98
CSM3YMR048W PRP46Q12417 451 aaPredicted RBP2.71□□□□□ -1.98
CSM3YMR048W DCP1Q12517 231 aaPredicted RBP2.71□□□□□ -1.98
CSM3YMR048W YAL064W-BO13512 126 aa2.7□□□□□ -1.98
CSM3YMR048W IPP1P00817 287 aaKnown RBP2.7□□□□□ -1.98
CSM3YMR048W MRP1P10662 321 aaKnown RBP2.7□□□□□ -1.98
CSM3YMR048W YPK2P18961 677 aa2.7□□□□□ -1.98
CSM3YMR048W PRE7P23724 241 aaKnown RBP2.7□□□□□ -1.98
CSM3YMR048W DPB2P24482 689 aaPredicted RBP2.7□□□□□ -1.98
CSM3YMR048W DOA4P32571 926 aa2.7□□□□□ -1.98
CSM3YMR048W ARC19P33204 171 aaKnown RBP2.7□□□□□ -1.98
CSM3YMR048W MAL32P38158 584 aa2.7□□□□□ -1.98
CSM3YMR048W MBA1P38300 278 aa2.7□□□□□ -1.98
CSM3YMR048W GRE3P38715 327 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
CSM3YMR048W RPE1P46969 238 aa2.7□□□□□ -1.98
CSM3YMR048W LOH1P47055 219 aa2.7□□□□□ -1.98
CSM3YMR048W YAE1P47118 141 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms