RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C ECM18Q04623 453 aa5.56□□□□□ -1.52
SKI2YLR398C ARR3Q06598 404 aa5.56□□□□□ -1.52
SKI2YLR398C YOR105WQ08504 108 aa5.56□□□□□ -1.52
SKI2YLR398C RPS9BP05755 195 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C ERG24P32462 438 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C HEM14P40012 539 aa5.55□□□□□ -1.52
SKI2YLR398C TTI2P47168 421 aa5.55□□□□□ -1.52
SKI2YLR398C FUN19P28003 413 aaPredicted RBP5.55□□□□□ -1.52
SKI2YLR398C YUH1P35127 236 aa5.55□□□□□ -1.52
SKI2YLR398C YAL037WP39728 267 aa5.55□□□□□ -1.52
SKI2YLR398C SMB1P40018 196 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C TIF34P40217 347 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C ATF1P40353 525 aa5.55□□□□□ -1.52
SKI2YLR398C YIL161WP40449 235 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C YJR012CP47087 207 aa5.55□□□□□ -1.52
SKI2YLR398C DFG5Q05031 458 aa5.55□□□□□ -1.52
SKI2YLR398C PIB1Q06651 286 aa5.55□□□□□ -1.52
SKI2YLR398C YOR387CQ08910 206 aa5.55□□□□□ -1.52
SKI2YLR398C CSR2Q12734 1121 aa5.55□□□□□ -1.52
SKI2YLR398C POX1P13711 748 aa5.55□□□□□ -1.52
SKI2YLR398C PRE7P23724 241 aaKnown RBP5.55□□□□□ -1.52
SKI2YLR398C YIL163CP40448 117 aa5.55□□□□□ -1.52
SKI2YLR398C YDR102CQ03864 110 aa5.55□□□□□ -1.52
SKI2YLR398C YOR338WQ99326 363 aa5.55□□□□□ -1.52
SKI2YLR398C GLN3P18494 730 aa5.54□□□□□ -1.52
SKI2YLR398C PAU5P43575 122 aa5.54□□□□□ -1.52
SKI2YLR398C ATG27P46989 271 aa5.54□□□□□ -1.52
SKI2YLR398C MTM1P53320 366 aa5.54□□□□□ -1.52
SKI2YLR398C SHH3Q04487 196 aa5.54□□□□□ -1.52
SKI2YLR398C CTR3Q06686 241 aa5.54□□□□□ -1.52
SKI2YLR398C FSF1Q12029 327 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C ATG5Q12380 294 aa5.54□□□□□ -1.52
SKI2YLR398C GUT2P32191 649 aa5.54□□□□□ -1.52
SKI2YLR398C UGX2P32772 223 aa5.54□□□□□ -1.52
SKI2YLR398C MGM101P32787 269 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C SCO2P38072 301 aa5.54□□□□□ -1.52
SKI2YLR398C TRS20P38334 175 aa5.54□□□□□ -1.52
SKI2YLR398C VPS29P38759 282 aa5.54□□□□□ -1.52
SKI2YLR398C YIP4P53093 235 aa5.54□□□□□ -1.52
SKI2YLR398C OCA2P53949 197 aa5.54□□□□□ -1.52
SKI2YLR398C YMR253CQ04835 414 aa5.54□□□□□ -1.52
SKI2YLR398C GRX8Q05926 109 aa5.54□□□□□ -1.52
SKI2YLR398C YDR262WQ12331 272 aa5.54□□□□□ -1.52
SKI2YLR398C RAX2Q12465 1220 aa5.54□□□□□ -1.52
SKI2YLR398C NHP6BP11633 99 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C MIR1P23641 311 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C SPC29P33419 253 aa5.54□□□□□ -1.52
SKI2YLR398C YEA6P39953 335 aa5.54□□□□□ -1.52
SKI2YLR398C YIL108WP40483 696 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C COQ5P49017 307 aa5.54□□□□□ -1.52
SKI2YLR398C RNH201P53942 307 aa5.54□□□□□ -1.52
SKI2YLR398C ERG13P54839 491 aaKnown RBP5.54□□□□□ -1.52
SKI2YLR398C YML096WQ04489 525 aa5.54□□□□□ -1.52
SKI2YLR398C GEP3Q08622 556 aa5.54□□□□□ -1.52
SKI2YLR398C NPR1P22211 790 aa5.53□□□□□ -1.52
SKI2YLR398C FMT1P32785 401 aa5.53□□□□□ -1.52
SKI2YLR398C SUI1P32911 108 aaKnown RBP5.53□□□□□ -1.52
SKI2YLR398C YPR127WQ06494 345 aa5.53□□□□□ -1.52
SKI2YLR398C YPR147CQ06522 304 aaKnown RBP5.53□□□□□ -1.52
SKI2YLR398C PRP46Q12417 451 aaPredicted RBP5.53□□□□□ -1.52
SKI2YLR398C MRS4P23500 304 aa5.53□□□□□ -1.52
SKI2YLR398C PAD1P33751 242 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SKI2YLR398C MXR1P40029 184 aa5.53□□□□□ -1.52
SKI2YLR398C RPL13BP40212 199 aaKnown RBP5.53□□□□□ -1.52
SKI2YLR398C YDL183CP48569 320 aa5.53□□□□□ -1.52
SKI2YLR398C PAM18Q07914 168 aa5.53□□□□□ -1.52
SKI2YLR398C YLR030WQ07967 263 aa5.53□□□□□ -1.52
SKI2YLR398C RKI1Q12189 258 aa5.53□□□□□ -1.52
SKI2YLR398C RDL1Q12305 139 aaKnown RBP5.53□□□□□ -1.52
SKI2YLR398C RPL13AQ12690 199 aaPredicted RBP5.53□□□□□ -1.52
SKI2YLR398C MSB2P32334 1306 aa5.53□□□□□ -1.52
SKI2YLR398C ATX1P38636 73 aa5.53□□□□□ -1.52
SKI2YLR398C YHL026CP38740 315 aa5.53□□□□□ -1.52
SKI2YLR398C CDC40P40968 455 aaPredicted RBP5.53□□□□□ -1.52
SKI2YLR398C DAL4Q04895 635 aa5.53□□□□□ -1.52
SKI2YLR398C YPR174CQ06616 221 aaPredicted RBP5.53□□□□□ -1.52
SKI2YLR398C YBL112CQ3E7Y4 105 aa5.53□□□□□ -1.52
SKI2YLR398C GAL7P08431 366 aa5.52□□□□□ -1.53
SKI2YLR398C YKL071WP36086 256 aa5.52□□□□□ -1.53
SKI2YLR398C YER134CP40081 178 aa5.52□□□□□ -1.53
SKI2YLR398C POP1P41812 875 aa5.52□□□□□ -1.53
SKI2YLR398C NIF3P53081 288 aa5.52□□□□□ -1.53
SKI2YLR398C POS5Q06892 414 aa5.52□□□□□ -1.53
SKI2YLR398C UTP23Q12339 254 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C HYP2P23301 157 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C TVP23P38962 199 aa5.52□□□□□ -1.53
SKI2YLR398C PRE5P40302 234 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C CAB4P53332 305 aa5.52□□□□□ -1.53
SKI2YLR398C HLR1Q04429 423 aa5.52□□□□□ -1.53
SKI2YLR398C ALG6Q12001 544 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C TPT1Q12272 230 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C ORT1Q12375 292 aa5.52□□□□□ -1.53
SKI2YLR398C YEA4P40004 342 aa5.52□□□□□ -1.53
SKI2YLR398C RPL21AQ02753 160 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C STP4Q07351 490 aa5.52□□□□□ -1.53
SKI2YLR398C RPL21BQ12672 160 aaKnown RBP5.52□□□□□ -1.53
SKI2YLR398C RPP2AP05319 106 aaKnown RBP5.51□□□□□ -1.53
SKI2YLR398C MKK2P32491 506 aa5.51□□□□□ -1.53
SKI2YLR398C MST28P39552 234 aa5.51□□□□□ -1.53
SKI2YLR398C OST1P41543 476 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms