RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W ATG39Q06159 398 aa2.06□□□□□ -2.08
NOP56YLR197W RDS3Q06835 107 aaPredicted RBP2.06□□□□□ -2.08
NOP56YLR197W YHR032W-AP0C5N6 59 aa2.05□□□□□ -2.08
NOP56YLR197W OAC1P32332 324 aa2.05□□□□□ -2.08
NOP56YLR197W CLB6P32943 380 aa2.05□□□□□ -2.08
NOP56YLR197W DOG2P38773 246 aa2.05□□□□□ -2.08
NOP56YLR197W DOG1P38774 246 aa2.05□□□□□ -2.08
NOP56YLR197W MED6P38782 295 aa2.05□□□□□ -2.08
NOP56YLR197W DSK2P48510 373 aa2.05□□□□□ -2.08
NOP56YLR197W SUE1Q06524 206 aa2.05□□□□□ -2.08
NOP56YLR197W MDM32Q12171 622 aa2.05□□□□□ -2.08
NOP56YLR197W IKI3Q06706 1349 aaKnown RBP2.04□□□□□ -2.08
NOP56YLR197W VMA11P32842 164 aa2.04□□□□□ -2.08
NOP56YLR197W ECM33P38248 429 aaKnown RBP2.04□□□□□ -2.08
NOP56YLR197W YJR146WP47174 117 aa2.04□□□□□ -2.08
NOP56YLR197W RTC4P53850 401 aa2.04□□□□□ -2.08
NOP56YLR197W SLM2P53955 656 aa2.04□□□□□ -2.08
NOP56YLR197W PRM15Q03262 622 aa2.04□□□□□ -2.08
NOP56YLR197W AKR2Q12013 749 aa2.04□□□□□ -2.08
NOP56YLR197W VPS68Q12016 184 aa2.04□□□□□ -2.08
NOP56YLR197W SEC4P07560 215 aaKnown RBP2.03□□□□□ -2.08
NOP56YLR197W TRR1P29509 319 aaKnown RBP2.03□□□□□ -2.08
NOP56YLR197W SNX4P47057 423 aa2.03□□□□□ -2.08
NOP56YLR197W GGA1Q06336 557 aa2.03□□□□□ -2.08
NOP56YLR197W MHT1Q12525 324 aa2.03□□□□□ -2.08
NOP56YLR197W RPL25P04456 142 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W RPL9AP05738 191 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W YPR170W-BP0C5R9 85 aa2.02□□□□□ -2.09
NOP56YLR197W SCO1P23833 295 aa2.02□□□□□ -2.09
NOP56YLR197W KDX1P36005 433 aa2.02□□□□□ -2.09
NOP56YLR197W SRP14P38985 146 aa2.02□□□□□ -2.09
NOP56YLR197W IRC22P40006 225 aa2.02□□□□□ -2.09
NOP56YLR197W SMD3P43321 101 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W RPL9BP51401 191 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W COS6P53344 381 aa2.02□□□□□ -2.09
NOP56YLR197W YIP3P53633 176 aa2.02□□□□□ -2.09
NOP56YLR197W LSM7P53905 115 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W YNL010WP53981 241 aaKnown RBP2.02□□□□□ -2.09
NOP56YLR197W RGM1Q00453 211 aa2.02□□□□□ -2.09
NOP56YLR197W LPP1Q04396 274 aa2.02□□□□□ -2.09
NOP56YLR197W GRE1Q08969 168 aa2.02□□□□□ -2.09
NOP56YLR197W ATG22P25568 528 aa2.01□□□□□ -2.09
NOP56YLR197W TCA17P32613 152 aa2.01□□□□□ -2.09
NOP56YLR197W FES1P38260 290 aa2.01□□□□□ -2.09
NOP56YLR197W CTR2P38865 189 aa2.01□□□□□ -2.09
NOP56YLR197W RMD6P39975 231 aa2.01□□□□□ -2.09
NOP56YLR197W NRK1P53915 240 aa2.01□□□□□ -2.09
NOP56YLR197W SNO1Q03144 224 aa2.01□□□□□ -2.09
NOP56YLR197W ARR2Q06597 130 aa2.01□□□□□ -2.09
NOP56YLR197W USB1Q12208 290 aaKnown RBP2.01□□□□□ -2.09
NOP56YLR197W MRS1P07266 363 aa2.01□□□□□ -2.09
NOP56YLR197W GCY1P14065 312 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
NOP56YLR197W PDS1P40316 373 aaPredicted RBP2.01□□□□□ -2.09
NOP56YLR197W YLR460CP54007 376 aa2.01□□□□□ -2.09
NOP56YLR197W PET191Q02772 108 aa2.01□□□□□ -2.09
NOP56YLR197W NOC4Q06512 552 aaPredicted RBP2.01□□□□□ -2.09
NOP56YLR197W YLR036CQ07986 203 aa2.01□□□□□ -2.09
NOP56YLR197W IGO2Q9P305 131 aa2.01□□□□□ -2.09
NOP56YLR197W CDC8P00572 216 aa2□□□□□ -2.09
NOP56YLR197W MSW1P04803 379 aa2□□□□□ -2.09
NOP56YLR197W CDC7P06243 507 aa2□□□□□ -2.09
NOP56YLR197W PUT1P09368 476 aa2□□□□□ -2.09
NOP56YLR197W GRX2P17695 143 aaKnown RBP2□□□□□ -2.09
NOP56YLR197W MAG1P22134 296 aaKnown RBP2□□□□□ -2.09
NOP56YLR197W PTM1P32857 523 aa2□□□□□ -2.09
NOP56YLR197W POP4P38336 279 aa2□□□□□ -2.09
NOP56YLR197W HMF1P40037 129 aaKnown RBP2□□□□□ -2.09
NOP56YLR197W MNN5P46982 586 aa2□□□□□ -2.09
NOP56YLR197W AIM25P47140 327 aa2□□□□□ -2.09
NOP56YLR197W YNL247WP53852 767 aaKnown RBP2□□□□□ -2.09
NOP56YLR197W YNL140CP53910 189 aa2□□□□□ -2.09
NOP56YLR197W YOL024WQ08172 172 aa2□□□□□ -2.09
NOP56YLR197W EMC6Q12431 108 aa2□□□□□ -2.09
NOP56YLR197W PSF1Q12488 208 aa2□□□□□ -2.09
NOP56YLR197W YDL085C-AQ3E7B7 68 aaKnown RBP2□□□□□ -2.09
NOP56YLR197W TDA8Q6B2U8 126 aa2□□□□□ -2.09
NOP56YLR197W TAH1P25638 111 aaPredicted RBP1.99□□□□□ -2.09
NOP56YLR197W MGT1P26188 188 aa1.99□□□□□ -2.09
NOP56YLR197W MTW1P39731 289 aa1.99□□□□□ -2.09
NOP56YLR197W AST2P39945 430 aaKnown RBP1.99□□□□□ -2.09
NOP56YLR197W YGR050CP53231 118 aa1.99□□□□□ -2.09
NOP56YLR197W ARO80Q04052 950 aa1.99□□□□□ -2.09
NOP56YLR197W QCR2P07257 368 aa1.98□□□□□ -2.09
NOP56YLR197W TRX3P25372 127 aa1.98□□□□□ -2.09
NOP56YLR197W ACP1P32463 125 aa1.98□□□□□ -2.09
NOP56YLR197W SKG1P36169 355 aa1.98□□□□□ -2.09
NOP56YLR197W OPY1P38271 328 aa1.98□□□□□ -2.09
NOP56YLR197W JAC1P53193 184 aa1.98□□□□□ -2.09
NOP56YLR197W COG5P53951 403 aa1.98□□□□□ -2.09
NOP56YLR197W GAS3Q03655 524 aa1.98□□□□□ -2.09
NOP56YLR197W GRX8Q05926 109 aa1.98□□□□□ -2.09
NOP56YLR197W ATO3Q12359 275 aa1.98□□□□□ -2.09
NOP56YLR197W YHR214C-EQ8TGK0 99 aa1.98□□□□□ -2.09
NOP56YLR197W FKS1P38631 1876 aaKnown RBP1.98□□□□□ -2.09
NOP56YLR197W REP2P03872 296 aa1.97□□□□□ -2.09
NOP56YLR197W SIR2P06700 562 aa1.97□□□□□ -2.09
NOP56YLR197W YLR156WP0CE96 114 aa1.97□□□□□ -2.09
NOP56YLR197W YLR159WP0CE97 114 aa1.97□□□□□ -2.09
NOP56YLR197W YLR161WP0CE98 114 aa1.97□□□□□ -2.09
NOP56YLR197W SNF4P12904 322 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms