RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C MPA43P53583 542 aaPredicted RBP3.94□□□□□ -1.78
TVP38YKR088C ALG9P53868 555 aaKnown RBP3.94□□□□□ -1.78
TVP38YKR088C SKO1Q02100 647 aa3.94□□□□□ -1.78
TVP38YKR088C RSM10Q03201 203 aa3.94□□□□□ -1.78
TVP38YKR088C ADD37Q03233 198 aa3.94□□□□□ -1.78
TVP38YKR088C YTH1Q06102 208 aaPredicted RBP3.94□□□□□ -1.78
TVP38YKR088C ARR2Q06597 130 aa3.94□□□□□ -1.78
TVP38YKR088C BSC6Q08280 497 aa3.94□□□□□ -1.78
TVP38YKR088C SRL2Q12020 392 aa3.94□□□□□ -1.78
TVP38YKR088C SRO7Q12038 1033 aa3.94□□□□□ -1.78
TVP38YKR088C RPL1AP0CX43 217 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C RPL1BP0CX44 217 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C MRPL44P19956 98 aa3.93□□□□□ -1.78
TVP38YKR088C MIR1P23641 311 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C POP5P28005 173 aa3.93□□□□□ -1.78
TVP38YKR088C PPA2P28239 310 aa3.93□□□□□ -1.78
TVP38YKR088C MRPL28P36527 147 aa3.93□□□□□ -1.78
TVP38YKR088C YAL037WP39728 267 aa3.93□□□□□ -1.78
TVP38YKR088C YNL208WP40159 199 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C FLX1P40464 311 aa3.93□□□□□ -1.78
TVP38YKR088C PHS1P40857 217 aa3.93□□□□□ -1.78
TVP38YKR088C IKS1P47042 667 aa3.93□□□□□ -1.78
TVP38YKR088C YJR141WP47172 347 aaPredicted RBP3.93□□□□□ -1.78
TVP38YKR088C MGA1P53050 456 aa3.93□□□□□ -1.78
TVP38YKR088C RMD9P53140 646 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C PET191Q02772 108 aa3.93□□□□□ -1.78
TVP38YKR088C THI74Q04083 370 aa3.93□□□□□ -1.78
TVP38YKR088C CUE4Q04201 117 aaPredicted RBP3.93□□□□□ -1.78
TVP38YKR088C SEN15Q04675 128 aa3.93□□□□□ -1.78
TVP38YKR088C AVO2Q04749 426 aa3.93□□□□□ -1.78
TVP38YKR088C YLR456WQ06199 204 aa3.93□□□□□ -1.78
TVP38YKR088C MHR1Q06630 226 aa3.93□□□□□ -1.78
TVP38YKR088C MRX9Q07349 420 aaKnown RBP3.93□□□□□ -1.78
TVP38YKR088C MCP1Q12106 302 aa3.93□□□□□ -1.78
TVP38YKR088C YOR343CQ12484 108 aa3.93□□□□□ -1.78
TVP38YKR088C CBP6P07253 162 aaPredicted RBP3.92□□□□□ -1.78
TVP38YKR088C MRS4P23500 304 aa3.92□□□□□ -1.78
TVP38YKR088C MEK1P24719 497 aaPredicted RBP3.92□□□□□ -1.78
TVP38YKR088C CDC50P25656 391 aa3.92□□□□□ -1.78
TVP38YKR088C RFA3P26755 122 aaKnown RBP3.92□□□□□ -1.78
TVP38YKR088C CPR5P35176 225 aa3.92□□□□□ -1.78
TVP38YKR088C FRM2P37261 193 aa3.92□□□□□ -1.78
TVP38YKR088C MRPS9P38120 278 aa3.92□□□□□ -1.78
TVP38YKR088C OM14P38325 134 aa3.92□□□□□ -1.78
TVP38YKR088C TRS20P38334 175 aa3.92□□□□□ -1.78
TVP38YKR088C YBR292CP38357 123 aa3.92□□□□□ -1.78
TVP38YKR088C SUR2P38992 349 aa3.92□□□□□ -1.78
TVP38YKR088C LYS1P38998 373 aaRIP-Chip data3.92□□□□□ -1.78not detected
TVP38YKR088C YGL262WP53054 175 aa3.92□□□□□ -1.78
TVP38YKR088C YGL114WP53134 725 aa3.92□□□□□ -1.78
TVP38YKR088C SAM50P53969 484 aa3.92□□□□□ -1.78
TVP38YKR088C VPS28Q02767 242 aa3.92□□□□□ -1.78
TVP38YKR088C EKI1Q03764 534 aa3.92□□□□□ -1.78
TVP38YKR088C YDR387CQ04162 555 aa3.92□□□□□ -1.78
TVP38YKR088C GMC1Q04399 608 aa3.92□□□□□ -1.78
TVP38YKR088C ERP4Q12450 207 aa3.92□□□□□ -1.78
TVP38YKR088C UBA3Q99344 299 aa3.92□□□□□ -1.78
TVP38YKR088C YCR101CP25607 182 aa3.91□□□□□ -1.78
TVP38YKR088C ARC40P38328 384 aaKnown RBP3.91□□□□□ -1.78
TVP38YKR088C SLM6P38343 150 aa3.91□□□□□ -1.78
TVP38YKR088C WSS1P38838 269 aa3.91□□□□□ -1.78
TVP38YKR088C YHR180WP38868 163 aa3.91□□□□□ -1.78
TVP38YKR088C YFR054CP43622 192 aa3.91□□□□□ -1.78
TVP38YKR088C YDL183CP48569 320 aa3.91□□□□□ -1.78
TVP38YKR088C BRR6P53062 197 aa3.91□□□□□ -1.78
TVP38YKR088C SMM1P53720 384 aaKnown RBP3.91□□□□□ -1.78
TVP38YKR088C YNR066CP53752 436 aa3.91□□□□□ -1.78
TVP38YKR088C RNH201P53942 307 aa3.91□□□□□ -1.78
TVP38YKR088C CYT2Q00873 224 aa3.91□□□□□ -1.78
TVP38YKR088C YMR082CQ04276 118 aa3.91□□□□□ -1.78
TVP38YKR088C YPR174CQ06616 221 aaPredicted RBP3.91□□□□□ -1.78
TVP38YKR088C MCH4Q08268 501 aa3.91□□□□□ -1.78
TVP38YKR088C YOR015WQ12169 119 aa3.91□□□□□ -1.78
TVP38YKR088C IZH2Q12442 317 aa3.91□□□□□ -1.78
TVP38YKR088C PAU19P0CE85 124 aa3.9□□□□□ -1.79
TVP38YKR088C PAU21P0CE86 164 aa3.9□□□□□ -1.79
TVP38YKR088C PAU22P0CE87 164 aa3.9□□□□□ -1.79
TVP38YKR088C OLE1P21147 510 aaKnown RBP3.9□□□□□ -1.79
TVP38YKR088C STP22P25604 385 aa3.9□□□□□ -1.79
TVP38YKR088C PAU3P25610 124 aa3.9□□□□□ -1.79
TVP38YKR088C MOB2P43563 287 aa3.9□□□□□ -1.79
TVP38YKR088C GWT1P47026 490 aa3.9□□□□□ -1.79
TVP38YKR088C YJR011CP47086 261 aaPredicted RBP3.9□□□□□ -1.79
TVP38YKR088C COQ5P49017 307 aa3.9□□□□□ -1.79
TVP38YKR088C RHO5P53879 331 aaKnown RBP3.9□□□□□ -1.79
TVP38YKR088C FSH2Q05015 223 aa3.9□□□□□ -1.79
TVP38YKR088C MIM1Q08176 113 aa3.9□□□□□ -1.79
TVP38YKR088C COA2Q3E823 68 aa3.9□□□□□ -1.79
TVP38YKR088C YNR034W-AQ3E841 98 aa3.9□□□□□ -1.79
TVP38YKR088C COA6Q3E846 104 aa3.9□□□□□ -1.79
TVP38YKR088C YDR157WA0A023PZE8 133 aa3.89□□□□□ -1.79
TVP38YKR088C SCEIP03882 235 aa3.89□□□□□ -1.79
TVP38YKR088C GDH1P07262 454 aaKnown RBP3.89□□□□□ -1.79
TVP38YKR088C MAK32P23060 363 aa3.89□□□□□ -1.79
TVP38YKR088C AIM17P23180 465 aaKnown RBP3.89□□□□□ -1.79
TVP38YKR088C MXR2P25566 168 aa3.89□□□□□ -1.79
TVP38YKR088C KRR1P25586 316 aaPredicted RBP3.89□□□□□ -1.79
TVP38YKR088C EHD3P28817 500 aa3.89□□□□□ -1.79
TVP38YKR088C AFG1P32317 509 aa3.89□□□□□ -1.79
TVP38YKR088C ERG2P32352 222 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms