RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W FCY2P17064 533 aa3□□□□□ -1.93
UBP12YJL197W RPF1P38805 295 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W GLE2P40066 365 aa3□□□□□ -1.93
UBP12YJL197W CIN5P40917 295 aa3□□□□□ -1.93
UBP12YJL197W GPI17Q04080 534 aa3□□□□□ -1.93
UBP12YJL197W MPD1Q12404 318 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W MBF1O14467 151 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W SCO1P23833 295 aa3□□□□□ -1.93
UBP12YJL197W YCR023CP25351 611 aa3□□□□□ -1.93
UBP12YJL197W TRR2P38816 342 aa3□□□□□ -1.93
UBP12YJL197W BDH1P39714 382 aa3□□□□□ -1.93
UBP12YJL197W VMA10P48836 114 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W YMR244WQ04018 355 aa3□□□□□ -1.93
UBP12YJL197W ECM19Q06011 112 aa3□□□□□ -1.93
UBP12YJL197W YOL160WQ08321 113 aa3□□□□□ -1.93
UBP12YJL197W GPI18P38211 433 aa2.99□□□□□ -1.93
UBP12YJL197W FMP23P38231 175 aa2.99□□□□□ -1.93
UBP12YJL197W IRC22P40006 225 aa2.99□□□□□ -1.93
UBP12YJL197W RPA43P46669 326 aa2.99□□□□□ -1.93
UBP12YJL197W RBL2P48606 106 aaKnown RBP2.99□□□□□ -1.93
UBP12YJL197W PGA1P53896 198 aa2.99□□□□□ -1.93
UBP12YJL197W YMR317WQ04893 1140 aa2.99□□□□□ -1.93
UBP12YJL197W SLD7Q08457 257 aa2.99□□□□□ -1.93
UBP12YJL197W ISD11Q6Q560 94 aa2.99□□□□□ -1.93
UBP12YJL197W PBI2P0CT04 75 aaKnown RBP2.99□□□□□ -1.93
UBP12YJL197W MRPS28P21771 286 aa2.99□□□□□ -1.93
UBP12YJL197W YPL039WQ03080 316 aa2.99□□□□□ -1.93
UBP12YJL197W ATG22P25568 528 aa2.99□□□□□ -1.93
UBP12YJL197W SFC1P33303 322 aa2.99□□□□□ -1.93
UBP12YJL197W TRM12Q04235 462 aa2.99□□□□□ -1.93
UBP12YJL197W YEL009C-AA0A023PZF2 135 aa2.98□□□□□ -1.93
UBP12YJL197W PET9P18239 318 aaKnown RBP2.98□□□□□ -1.93
UBP12YJL197W IPI1P38803 334 aaPredicted RBP2.98□□□□□ -1.93
UBP12YJL197W RSM27P53305 110 aa2.98□□□□□ -1.93
UBP12YJL197W CSN9Q03981 162 aa2.98□□□□□ -1.93
UBP12YJL197W YOL029CQ08187 201 aa2.98□□□□□ -1.93
UBP12YJL197W YPR014CQ6B0W2 109 aa2.98□□□□□ -1.93
UBP12YJL197W YHR214C-EQ8TGK0 99 aa2.98□□□□□ -1.93
UBP12YJL197W PEP1P32319 1579 aa2.98□□□□□ -1.93
UBP12YJL197W YKL102CP34249 101 aa2.98□□□□□ -1.93
UBP12YJL197W AST2P39945 430 aaKnown RBP2.98□□□□□ -1.93
UBP12YJL197W BOR1P53838 576 aa2.98□□□□□ -1.93
UBP12YJL197W LPP1Q04396 274 aa2.98□□□□□ -1.93
UBP12YJL197W DGA1Q08650 418 aa2.98□□□□□ -1.93
UBP12YJL197W NIP7Q08962 181 aaKnown RBP2.98□□□□□ -1.93
UBP12YJL197W SLM6P38343 150 aa2.98□□□□□ -1.93
UBP12YJL197W MED6P38782 295 aa2.98□□□□□ -1.93
UBP12YJL197W RRT13P40042 185 aa2.98□□□□□ -1.93
UBP12YJL197W SKI6P46948 246 aaPredicted RBP2.98□□□□□ -1.93
UBP12YJL197W RAV2Q03956 351 aa2.98□□□□□ -1.93
UBP12YJL197W YDL211CQ12121 372 aa2.98□□□□□ -1.93
UBP12YJL197W PST1Q12355 444 aa2.98□□□□□ -1.93
UBP12YJL197W YPL247CQ12523 523 aa2.98□□□□□ -1.93
UBP12YJL197W POP4P38336 279 aa2.97□□□□□ -1.93
UBP12YJL197W SNM1P40993 198 aa2.97□□□□□ -1.93
UBP12YJL197W ARO8P53090 500 aaKnown RBP2.97□□□□□ -1.93
UBP12YJL197W OSH6Q02201 448 aa2.97□□□□□ -1.93
UBP12YJL197W YBL112CQ3E7Y4 105 aa2.97□□□□□ -1.93
UBP12YJL197W TDA8Q6B2U8 126 aa2.97□□□□□ -1.93
UBP12YJL197W ECM34P38728 170 aa2.97□□□□□ -1.93
UBP12YJL197W ARP3P47117 449 aaKnown RBP2.97□□□□□ -1.93
UBP12YJL197W SPC24Q04477 213 aa2.97□□□□□ -1.93
UBP12YJL197W CBP6P07253 162 aaPredicted RBP2.97□□□□□ -1.93
UBP12YJL197W TRM7P38238 310 aaKnown RBP2.97□□□□□ -1.93
UBP12YJL197W COS8P38723 381 aa2.97□□□□□ -1.93
UBP12YJL197W XPT1P47165 209 aa2.97□□□□□ -1.93
UBP12YJL197W ADH3P07246 375 aaKnown RBP2.96□□□□□ -1.94
UBP12YJL197W SPO13P23624 291 aa2.96□□□□□ -1.94
UBP12YJL197W SEC17P32602 292 aa2.96□□□□□ -1.94
UBP12YJL197W YBR063CP38083 404 aa2.96□□□□□ -1.94
UBP12YJL197W YLR179CQ06252 201 aaKnown RBP2.96□□□□□ -1.94
UBP12YJL197W YAL067W-AQ8TGK6 75 aa2.96□□□□□ -1.94
UBP12YJL197W COX4P04037 155 aa2.96□□□□□ -1.94
UBP12YJL197W YGR201CP42936 225 aa2.96□□□□□ -1.94
UBP12YJL197W YDR249CQ03787 373 aa2.96□□□□□ -1.94
UBP12YJL197W YOR1P53049 1477 aa2.96□□□□□ -1.94
UBP12YJL197W RPB9P27999 122 aa2.96□□□□□ -1.94
UBP12YJL197W MDM34P53083 459 aa2.96□□□□□ -1.94
UBP12YJL197W YPL162CQ12042 273 aa2.96□□□□□ -1.94
UBP12YJL197W MYO2P19524 1574 aaKnown RBP2.95□□□□□ -1.94
UBP12YJL197W RNP1P32385 249 aa2.95□□□□□ -1.94
UBP12YJL197W MRPL27P36526 146 aaPredicted RBP2.95□□□□□ -1.94
UBP12YJL197W MNN5P46982 586 aa2.95□□□□□ -1.94
UBP12YJL197W YGL101WP53144 215 aa2.95□□□□□ -1.94
UBP12YJL197W YGL088WP53151 121 aa2.95□□□□□ -1.94
UBP12YJL197W CAX4P53223 239 aa2.95□□□□□ -1.94
UBP12YJL197W YPL264CQ08980 353 aa2.95□□□□□ -1.94
UBP12YJL197W DSF1P0CX08 502 aa2.95□□□□□ -1.94
UBP12YJL197W YNR073CP0CX09 502 aa2.95□□□□□ -1.94
UBP12YJL197W PHB1P40961 287 aa2.95□□□□□ -1.94
UBP12YJL197W PFS2P42841 465 aaKnown RBP2.95□□□□□ -1.94
UBP12YJL197W TDA4P47153 279 aa2.95□□□□□ -1.94
UBP12YJL197W DYN2Q02647 92 aa2.95□□□□□ -1.94
UBP12YJL197W TSC3Q3E790 80 aa2.95□□□□□ -1.94
UBP12YJL197W YOL085CQ99345 113 aa2.95□□□□□ -1.94
UBP12YJL197W NHP6AP11632 93 aaKnown RBP2.95□□□□□ -1.94
UBP12YJL197W SKG1P36169 355 aa2.95□□□□□ -1.94
UBP12YJL197W FIS1P40515 155 aa2.95□□□□□ -1.94
UBP12YJL197W RPC19P28000 142 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W YBL081WP38180 368 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms