RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W DBP3P20447 523 aaKnown RBP-0.63□□□□□ -2.51
RPL39YJL189W CDC10P25342 322 aaKnown RBP-0.63□□□□□ -2.51
RPL39YJL189W ATG22P25568 528 aa-0.63□□□□□ -2.51
RPL39YJL189W SWP1Q02795 286 aa-0.63□□□□□ -2.51
RPL39YJL189W MDM35O60200 86 aa-0.64□□□□□ -2.51
RPL39YJL189W POL30P15873 258 aaKnown RBP-0.64□□□□□ -2.51
RPL39YJL189W DAL82P21705 255 aa-0.64□□□□□ -2.51
RPL39YJL189W YMD8Q03697 442 aa-0.64□□□□□ -2.51
RPL39YJL189W ADH6Q04894 360 aaKnown RBP-0.64□□□□□ -2.51
RPL39YJL189W YRA1Q12159 226 aaKnown RBP-0.64□□□□□ -2.51
RPL39YJL189W SNU23Q12368 194 aaPredicted RBP-0.64□□□□□ -2.51
RPL39YJL189W COA3Q3E7B2 85 aa-0.64□□□□□ -2.51
RPL39YJL189W YPL073CP40323 161 aa-0.65□□□□□ -2.51
RPL39YJL189W GVP36P40531 326 aaKnown RBP-0.65□□□□□ -2.51
RPL39YJL189W CUE4Q04201 117 aaPredicted RBP-0.65□□□□□ -2.51
RPL39YJL189W GPM2Q12008 311 aa-0.65□□□□□ -2.51
RPL39YJL189W YKL075CP36083 450 aa-0.66□□□□□ -2.52
RPL39YJL189W MRPL28P36527 147 aa-0.66□□□□□ -2.52
RPL39YJL189W TSC3Q3E790 80 aa-0.66□□□□□ -2.52
RPL39YJL189W POP4P38336 279 aa-0.67□□□□□ -2.52
RPL39YJL189W DOG2P38773 246 aa-0.67□□□□□ -2.52
RPL39YJL189W YAR1P46683 200 aa-0.67□□□□□ -2.52
RPL39YJL189W TCP1P12612 559 aaKnown RBP-0.68□□□□□ -2.52
RPL39YJL189W PRX1P34227 261 aaKnown RBP-0.68□□□□□ -2.52
RPL39YJL189W CDC36P06100 191 aaPredicted RBP-0.69□□□□□ -2.52
RPL39YJL189W YHL037CP38733 133 aa-0.69□□□□□ -2.52
RPL39YJL189W BTS1Q12051 335 aa-0.69□□□□□ -2.52
RPL39YJL189W SRB4P32569 687 aa-0.7□□□□□ -2.52
RPL39YJL189W SHE2P36068 246 aaKnown RBP RIP-Chip data-0.7□□□□□ -2.52not detected
RPL39YJL189W MRPL15P36523 253 aa-0.7□□□□□ -2.52
RPL39YJL189W YDR274CP87283 123 aa-0.7□□□□□ -2.52
RPL39YJL189W SDO1Q07953 250 aaKnown RBP-0.7□□□□□ -2.52
RPL39YJL189W MCP1Q12106 302 aa-0.7□□□□□ -2.52
RPL39YJL189W YIL002W-AQ3E7Z5 69 aa-0.7□□□□□ -2.52
RPL39YJL189W TDA8Q6B2U8 126 aa-0.7□□□□□ -2.52
RPL39YJL189W YBR285WP38354 144 aa-0.71□□□□□ -2.52
RPL39YJL189W YJR149WP47177 404 aa-0.71□□□□□ -2.52
RPL39YJL189W EGD1Q02642 157 aaKnown RBP-0.71□□□□□ -2.52
RPL39YJL189W YDR391CQ04170 232 aa-0.71□□□□□ -2.52
RPL39YJL189W YPR203WQ08994 102 aa-0.71□□□□□ -2.52
RPL39YJL189W DRS2P39524 1355 aa-0.71□□□□□ -2.52
RPL39YJL189W YER034WP40022 185 aaKnown RBP-0.72□□□□□ -2.52
RPL39YJL189W YFL051CP43552 160 aa-0.72□□□□□ -2.52
RPL39YJL189W YPR174CQ06616 221 aaPredicted RBP-0.72□□□□□ -2.52
RPL39YJL189W CSM4Q08955 156 aa-0.72□□□□□ -2.52
RPL39YJL189W CCW12Q12127 133 aa-0.72□□□□□ -2.52
RPL39YJL189W RPL24AP04449 155 aaKnown RBP-0.73□□□□□ -2.53
RPL39YJL189W OPI1P21957 404 aa-0.73□□□□□ -2.53
RPL39YJL189W KRR1P25586 316 aaPredicted RBP-0.73□□□□□ -2.53
RPL39YJL189W UTP30P36144 274 aaKnown RBP-0.73□□□□□ -2.53
RPL39YJL189W YIL102CP40488 101 aa-0.73□□□□□ -2.53
RPL39YJL189W EMC2P47133 292 aaKnown RBP-0.73□□□□□ -2.53
RPL39YJL189W DID2P69771 204 aa-0.73□□□□□ -2.53
RPL39YJL189W SEC17P32602 292 aa-0.74□□□□□ -2.53
RPL39YJL189W MGM101P32787 269 aaKnown RBP-0.74□□□□□ -2.53
RPL39YJL189W TVP23P38962 199 aa-0.74□□□□□ -2.53
RPL39YJL189W HPA3P39979 161 aa-0.74□□□□□ -2.53
RPL39YJL189W TRM9P49957 279 aa-0.74□□□□□ -2.53
RPL39YJL189W FIT2Q08906 153 aa-0.74□□□□□ -2.53
RPL39YJL189W AHT1P29589 182 aa-0.75□□□□□ -2.53
RPL39YJL189W MRPL37P36532 105 aa-0.75□□□□□ -2.53
RPL39YJL189W YHL018WP38744 120 aaPredicted RBP-0.75□□□□□ -2.53
RPL39YJL189W RPL27AP0C2H6 136 aaKnown RBP-0.76□□□□□ -2.53
RPL39YJL189W RPT5P33297 434 aaKnown RBP-0.76□□□□□ -2.53
RPL39YJL189W RPB7P34087 171 aa-0.76□□□□□ -2.53
RPL39YJL189W SKG1P36169 355 aa-0.76□□□□□ -2.53
RPL39YJL189W MET31Q03081 177 aa-0.76□□□□□ -2.53
RPL39YJL189W MSF1P08425 469 aa-0.77□□□□□ -2.53
RPL39YJL189W SPO13P23624 291 aa-0.77□□□□□ -2.53
RPL39YJL189W YAR064WP39563 99 aa-0.77□□□□□ -2.53
RPL39YJL189W MPC3P53311 146 aa-0.77□□□□□ -2.53
RPL39YJL189W BNA7Q04066 261 aa-0.77□□□□□ -2.53
RPL39YJL189W YPR013CQ12145 317 aa-0.77□□□□□ -2.53
RPL39YJL189W LSO2Q3E772 92 aaKnown RBP-0.77□□□□□ -2.53
RPL39YJL189W FAS1P07149 2051 aaKnown RBP-0.77□□□□□ -2.53
RPL39YJL189W SEN2P16658 377 aa-0.78□□□□□ -2.53
RPL39YJL189W HOC1P47124 396 aa-0.78□□□□□ -2.53
RPL39YJL189W MCM22P47167 239 aa-0.78□□□□□ -2.53
RPL39YJL189W ODC2Q99297 307 aa-0.78□□□□□ -2.53
RPL39YJL189W YIL177CP40434 1758 aa-0.78□□□□□ -2.53
RPL39YJL189W YJL225CP40889 1758 aa-0.78□□□□□ -2.53
RPL39YJL189W DAL80P26343 269 aa-0.79□□□□□ -2.54
RPL39YJL189W NUP84P52891 726 aa-0.79□□□□□ -2.54
RPL39YJL189W YML108WQ03759 105 aa-0.79□□□□□ -2.54
RPL39YJL189W UPS3Q04006 179 aa-0.79□□□□□ -2.54
RPL39YJL189W COX8P04039 78 aa-0.8□□□□□ -2.54
RPL39YJL189W UBC8P28263 218 aa-0.8□□□□□ -2.54
RPL39YJL189W YBR242WP38331 238 aa-0.8□□□□□ -2.54
RPL39YJL189W NSA1P53136 463 aaPredicted RBP-0.8□□□□□ -2.54
RPL39YJL189W LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.8□□□□□ -2.54not detected
RPL39YJL189W ATP15P21306 62 aa-0.81□□□□□ -2.54
RPL39YJL189W NTF2P33331 125 aaKnown RBP-0.82□□□□□ -2.54
RPL39YJL189W PRM8P53174 237 aa-0.82□□□□□ -2.54
RPL39YJL189W ERV25P54837 211 aaKnown RBP-0.82□□□□□ -2.54
RPL39YJL189W DGA1Q08650 418 aa-0.82□□□□□ -2.54
RPL39YJL189W PRM3Q08931 133 aa-0.82□□□□□ -2.54
RPL39YJL189W YFR032C-BQ8TGU2 87 aa-0.82□□□□□ -2.54
RPL39YJL189W IDH1P28834 360 aaKnown RBP RIP-Chip data-0.83□□□□□ -2.54not detected
RPL39YJL189W DAD4P69851 72 aa-0.83□□□□□ -2.54
RPL39YJL189W FIT1Q04433 528 aa-0.83□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms