RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	SKG1	P36169	355 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	RTC3	P38804	111 aa	Predicted RBP	1.19	□□□□□ -2.22
NUP82	YJL061W	YER135C	P40082	130 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	MSS2	P40990	351 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	SPG3	Q04398	127 aa	Predicted RBP	1.19	□□□□□ -2.22
NUP82	YJL061W	SML1	Q04964	104 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	YOL162W	P0CF19	215 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	STE18	P18852	110 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	COQ1	P18900	473 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	ERG28	P40030	148 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	TSC3	Q3E790	80 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	TDA8	Q6B2U8	126 aa		1.19	□□□□□ -2.22
NUP82	YJL061W	YBR219C	P38317	127 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	YNL217W	P40152	326 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	ADO1	P47143	340 aa	Known RBP	1.18	□□□□□ -2.22
NUP82	YJL061W	MGA1	P53050	456 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	BOL2	P53082	120 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	SWP1	Q02795	286 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	RPL27B	P0C2H7	136 aa	Known RBP	1.18	□□□□□ -2.22
NUP82	YJL061W	TCA17	P32613	152 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	FZF1	P32805	299 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	PRP18	P33411	251 aa	Predicted RBP	1.18	□□□□□ -2.22
NUP82	YJL061W	PRX1	P34227	261 aa	Known RBP	1.18	□□□□□ -2.22
NUP82	YJL061W	YET1	P35723	206 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	CBT1	P36038	271 aa	Predicted RBP	1.18	□□□□□ -2.22
NUP82	YJL061W	UMP1	P38293	148 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	DOC1	P53068	250 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	GAS3	Q03655	524 aa		1.18	□□□□□ -2.22
NUP82	YJL061W	MGM101	P32787	269 aa	Known RBP	1.17	□□□□□ -2.22
NUP82	YJL061W	SNC2	P33328	115 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	YKR045C	P36138	183 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	MRPL17	P36528	281 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	RMD6	P39975	231 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	YNL194C	P40169	301 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	IRC18	P47056	224 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	RAD17	P48581	401 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	RNH1	Q04740	348 aa		1.17	□□□□□ -2.22
NUP82	YJL061W	GCN3	P14741	305 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	YGL010W	P25338	174 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	YRB2	P40517	327 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	PGA2	P53903	129 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	FLO9	P39712	1322 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	MET5	P47169	1442 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	CDC33	P07260	213 aa	Known RBP	1.16	□□□□□ -2.22
NUP82	YJL061W	SEC17	P32602	292 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	SIP3	P38717	1229 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	AST2	P39945	430 aa	Known RBP	1.16	□□□□□ -2.22
NUP82	YJL061W	PDR17	P53844	350 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	BNA7	Q04066	261 aa		1.16	□□□□□ -2.22
NUP82	YJL061W	TIM9	O74700	87 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	SEC4	P07560	215 aa	Known RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	CWC23	P52868	283 aa	Predicted RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	SAY1	P53324	424 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	MZM1	Q03429	123 aa	Predicted RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	YPL162C	Q12042	273 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	MCP1	Q12106	302 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	KSS1	P14681	368 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	PTM1	P32857	523 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	UTP30	P36144	274 aa	Known RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	YBR220C	P38318	560 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	RPL13B	P40212	199 aa	Known RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	GVP36	P40531	326 aa	Known RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	YGR050C	P53231	118 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	YLR162W	Q06235	118 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	CSI2	Q08054	341 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	GPM2	Q12008	311 aa		1.15	□□□□□ -2.23
NUP82	YJL061W	RPL13A	Q12690	199 aa	Predicted RBP	1.15	□□□□□ -2.23
NUP82	YJL061W	TUS1	Q06412	1307 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	YDR157W	A0A023PZE8	133 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	URA5	P13298	226 aa	Known RBP	1.14	□□□□□ -2.23
NUP82	YJL061W	BET1	P22804	142 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.14	□□□□□ -2.23	not detected
NUP82	YJL061W	TMA19	P35691	167 aa	Known RBP	1.14	□□□□□ -2.23
NUP82	YJL061W	TRM5	P38793	499 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	GAA1	P39012	614 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	YNR077C	P53758	84 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	ANT1	Q06497	328 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	FSF1	Q12029	327 aa	Known RBP	1.14	□□□□□ -2.23
NUP82	YJL061W	PDR18	P53756	1333 aa		1.14	□□□□□ -2.23
NUP82	YJL061W	RPL25	P04456	142 aa	Known RBP	1.13	□□□□□ -2.23
NUP82	YJL061W	ARG80	P07249	177 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	NTG1	P31378	399 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	TFC1	P32367	649 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	LSM7	P53905	115 aa	Known RBP	1.13	□□□□□ -2.23
NUP82	YJL061W	TIM11	P81449	96 aa	Predicted RBP	1.13	□□□□□ -2.23
NUP82	YJL061W	MDM32	Q12171	622 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	FPR1	P20081	114 aa	Known RBP	1.13	□□□□□ -2.23
NUP82	YJL061W	MAG1	P22134	296 aa	Known RBP	1.13	□□□□□ -2.23
NUP82	YJL061W	YBR209W	P38311	105 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	EAF6	P47128	113 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	YDR249C	Q03787	373 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	YHR214C-E	Q8TGK0	99 aa		1.13	□□□□□ -2.23
NUP82	YJL061W	RPB4	P20433	221 aa	Predicted RBP	1.12	□□□□□ -2.23
NUP82	YJL061W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.12	□□□□□ -2.23	not detected
NUP82	YJL061W	YBR285W	P38354	144 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	IKI1	P38874	309 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	COG5	P53951	403 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	GIS3	Q12418	502 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	ATG40	Q99325	256 aa		1.12	□□□□□ -2.23
NUP82	YJL061W	YIL177C	P40434	1758 aa		1.12	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms