RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W YAR068WP39564 161 aa2.62□□□□□ -1.99
CTM1YHR109W YER076CP40049 302 aa2.62□□□□□ -1.99
CTM1YHR109W FIS1P40515 155 aa2.62□□□□□ -1.99
CTM1YHR109W ECM11Q04110 302 aa2.62□□□□□ -1.99
CTM1YHR109W YFR032C-BQ8TGU2 87 aa2.62□□□□□ -1.99
CTM1YHR109W SIR2P06700 562 aa2.61□□□□□ -1.99
CTM1YHR109W PDS1P40316 373 aaPredicted RBP2.61□□□□□ -1.99
CTM1YHR109W GIS2P53849 153 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
CTM1YHR109W YLR036CQ07986 203 aa2.61□□□□□ -1.99
CTM1YHR109W YHR032W-AP0C5N6 59 aa2.61□□□□□ -1.99
CTM1YHR109W YCR090CP25654 182 aaKnown RBP2.61□□□□□ -1.99
CTM1YHR109W UTP30P36144 274 aaKnown RBP2.61□□□□□ -1.99
CTM1YHR109W AME1P38313 324 aa2.61□□□□□ -1.99
CTM1YHR109W YHR125WP38831 101 aa2.61□□□□□ -1.99
CTM1YHR109W MTW1P39731 289 aa2.61□□□□□ -1.99
CTM1YHR109W AST2P39945 430 aaKnown RBP2.61□□□□□ -1.99
CTM1YHR109W OST2P46964 130 aa2.61□□□□□ -1.99
CTM1YHR109W YNL184CP53876 108 aa2.61□□□□□ -1.99
CTM1YHR109W YML108WQ03759 105 aa2.61□□□□□ -1.99
CTM1YHR109W YOR268CQ08734 132 aa2.61□□□□□ -1.99
CTM1YHR109W YPL162CQ12042 273 aa2.61□□□□□ -1.99
CTM1YHR109W YER084WP40057 128 aa2.6□□□□□ -1.99
CTM1YHR109W UBC12P52491 188 aa2.6□□□□□ -1.99
CTM1YHR109W YIL177CP40434 1758 aa2.6□□□□□ -1.99
CTM1YHR109W YJL225CP40889 1758 aa2.6□□□□□ -1.99
CTM1YHR109W ATG22P25568 528 aa2.59□□□□□ -1.99
CTM1YHR109W MID2P36027 376 aa2.59□□□□□ -1.99
CTM1YHR109W COG5P53951 403 aa2.59□□□□□ -1.99
CTM1YHR109W DID2P69771 204 aa2.59□□□□□ -1.99
CTM1YHR109W YOR283WQ12040 230 aaKnown RBP2.59□□□□□ -1.99
CTM1YHR109W CCH1P50077 2039 aa2.59□□□□□ -1.99
CTM1YHR109W QCR2P07257 368 aa2.59□□□□□ -2
CTM1YHR109W YLR156WP0CE96 114 aa2.59□□□□□ -2
CTM1YHR109W YLR159WP0CE97 114 aa2.59□□□□□ -2
CTM1YHR109W YLR161WP0CE98 114 aa2.59□□□□□ -2
CTM1YHR109W HMF1P40037 129 aaKnown RBP2.59□□□□□ -2
CTM1YHR109W YIR035CP40579 254 aa2.59□□□□□ -2
CTM1YHR109W YMR315WQ04869 349 aaKnown RBP2.59□□□□□ -2
CTM1YHR109W Q0255P03881 472 aa2.58□□□□□ -2
CTM1YHR109W UBC6P33296 250 aaPredicted RBP2.58□□□□□ -2
CTM1YHR109W FES1P38260 290 aa2.58□□□□□ -2
CTM1YHR109W ARC15P40518 154 aaRIP-Chip data2.58□□□□□ -2not detected
CTM1YHR109W YGL235WP53071 178 aa2.58□□□□□ -2
CTM1YHR109W JAC1P53193 184 aa2.58□□□□□ -2
CTM1YHR109W YNL010WP53981 241 aaKnown RBP2.58□□□□□ -2
CTM1YHR109W SAS5Q99314 248 aa2.58□□□□□ -2
CTM1YHR109W MBF1O14467 151 aaKnown RBP2.57□□□□□ -2
CTM1YHR109W RPS24AP0CX31 135 aaKnown RBP2.57□□□□□ -2
CTM1YHR109W RPS24BP0CX32 135 aaKnown RBP2.57□□□□□ -2
CTM1YHR109W GRX2P17695 143 aaKnown RBP2.57□□□□□ -2
CTM1YHR109W VMA11P32842 164 aa2.57□□□□□ -2
CTM1YHR109W POP4P38336 279 aa2.57□□□□□ -2
CTM1YHR109W GLE2P40066 365 aa2.57□□□□□ -2
CTM1YHR109W YER188WP40103 239 aa2.57□□□□□ -2
CTM1YHR109W SMD3P43321 101 aaKnown RBP2.57□□□□□ -2
CTM1YHR109W TRM12Q04235 462 aa2.57□□□□□ -2
CTM1YHR109W ADH3P07246 375 aaKnown RBP2.56□□□□□ -2
CTM1YHR109W SEC17P32602 292 aa2.56□□□□□ -2
CTM1YHR109W CLG1P35190 452 aa2.56□□□□□ -2
CTM1YHR109W YKR032WP36127 104 aa2.56□□□□□ -2
CTM1YHR109W CTR2P38865 189 aa2.56□□□□□ -2
CTM1YHR109W RRP17Q04031 235 aaPredicted RBP2.56□□□□□ -2
CTM1YHR109W AGA2P32781 87 aa2.56□□□□□ -2
CTM1YHR109W MCP1Q12106 302 aa2.56□□□□□ -2
CTM1YHR109W PEX11Q12462 236 aa2.56□□□□□ -2
CTM1YHR109W RPL9AP05738 191 aaKnown RBP2.55□□□□□ -2
CTM1YHR109W MAG1P22134 296 aaKnown RBP2.55□□□□□ -2
CTM1YHR109W SKG1P36169 355 aa2.55□□□□□ -2
CTM1YHR109W ICE2P40499 491 aa2.55□□□□□ -2
CTM1YHR109W BUD13P46947 266 aaPredicted RBP2.55□□□□□ -2
CTM1YHR109W ARP3P47117 449 aaKnown RBP2.55□□□□□ -2
CTM1YHR109W RPL9BP51401 191 aaKnown RBP2.55□□□□□ -2
CTM1YHR109W CAB4P53332 305 aa2.55□□□□□ -2
CTM1YHR109W APJ1P53940 528 aa2.55□□□□□ -2
CTM1YHR109W AIM34Q03673 198 aa2.55□□□□□ -2
CTM1YHR109W PEX12Q04370 399 aa2.55□□□□□ -2
CTM1YHR109W PSF1Q12488 208 aa2.55□□□□□ -2
CTM1YHR109W CDC8P00572 216 aa2.54□□□□□ -2
CTM1YHR109W REP2P03872 296 aa2.54□□□□□ -2
CTM1YHR109W CNB1P25296 175 aa2.54□□□□□ -2
CTM1YHR109W FIG1P38224 298 aa2.54□□□□□ -2
CTM1YHR109W NVJ1P38881 321 aa2.54□□□□□ -2
CTM1YHR109W YJR111CP47148 283 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W ARO8P53090 500 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W YDR249CQ03787 373 aa2.54□□□□□ -2
CTM1YHR109W YDR114CQ04597 100 aa2.54□□□□□ -2
CTM1YHR109W YPR195CQ06594 109 aa2.54□□□□□ -2
CTM1YHR109W RIO1Q12196 484 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W FKS1P38631 1876 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W RPS28BP0C0X0 67 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W SNF4P12904 322 aa2.54□□□□□ -2
CTM1YHR109W KRE1P17260 313 aa2.54□□□□□ -2
CTM1YHR109W BET1P22804 142 aa2.54□□□□□ -2
CTM1YHR109W SCO1P23833 295 aa2.54□□□□□ -2
CTM1YHR109W MGT1P26188 188 aa2.54□□□□□ -2
CTM1YHR109W ARO7P32178 256 aa2.54□□□□□ -2
CTM1YHR109W FEX1Q08913 375 aa2.54□□□□□ -2
CTM1YHR109W FEX2Q08991 375 aa2.54□□□□□ -2
CTM1YHR109W YDL085C-AQ3E7B7 68 aaKnown RBP2.54□□□□□ -2
CTM1YHR109W RPS28AQ3E7X9 67 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms