RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C HMS1Q12398 434 aa2.35□□□□□ -2.03
TCD1YHR003C YDR524C-BQ3E6R4 66 aa2.35□□□□□ -2.03
TCD1YHR003C YPL229WQ99395 206 aa2.35□□□□□ -2.03
TCD1YHR003C COX5AP00424 153 aa2.34□□□□□ -2.03
TCD1YHR003C STE7P06784 515 aa2.34□□□□□ -2.03
TCD1YHR003C CMD1P06787 147 aaKnown RBP2.34□□□□□ -2.03
TCD1YHR003C SEC4P07560 215 aaKnown RBP2.34□□□□□ -2.03
TCD1YHR003C COS2P0CX12 379 aa2.34□□□□□ -2.03
TCD1YHR003C COS3P0CX13 379 aa2.34□□□□□ -2.03
TCD1YHR003C MSI1P13712 422 aa2.34□□□□□ -2.03
TCD1YHR003C ISY1P21374 235 aaPredicted RBP2.34□□□□□ -2.03
TCD1YHR003C CAM1P29547 415 aaKnown RBP2.34□□□□□ -2.03
TCD1YHR003C OAC1P32332 324 aa2.34□□□□□ -2.03
TCD1YHR003C YFL064CP43540 174 aa2.34□□□□□ -2.03
TCD1YHR003C COS4P43542 379 aa2.34□□□□□ -2.03
TCD1YHR003C SHY1P53266 389 aa2.34□□□□□ -2.03
TCD1YHR003C NRM1P53718 249 aa2.34□□□□□ -2.03
TCD1YHR003C AAH1P53909 347 aa2.34□□□□□ -2.03
TCD1YHR003C DID2P69771 204 aa2.34□□□□□ -2.03
TCD1YHR003C YDR248CQ03786 193 aa2.34□□□□□ -2.03
TCD1YHR003C SPC24Q04477 213 aa2.34□□□□□ -2.03
TCD1YHR003C DYN3Q04949 312 aa2.34□□□□□ -2.03
TCD1YHR003C YLR030WQ07967 263 aa2.34□□□□□ -2.03
TCD1YHR003C BEM2P39960 2167 aaKnown RBP2.34□□□□□ -2.04
TCD1YHR003C MDN1Q12019 4910 aaKnown RBP2.34□□□□□ -2.04
TCD1YHR003C DYN1P36022 4092 aa2.33□□□□□ -2.04
TCD1YHR003C YMR316C-AI2HB70 103 aa2.33□□□□□ -2.04
TCD1YHR003C RPS14AP06367 137 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C CUP2P15315 225 aa2.33□□□□□ -2.04
TCD1YHR003C IDP1P21954 428 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C SEC22P22214 214 aa2.33□□□□□ -2.04
TCD1YHR003C PRY2P36110 329 aa2.33□□□□□ -2.04
TCD1YHR003C FRM2P37261 193 aa2.33□□□□□ -2.04
TCD1YHR003C HEK2P38199 381 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
TCD1YHR003C ARN2P38724 620 aa2.33□□□□□ -2.04
TCD1YHR003C PTH1P38876 190 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C RPS14BP39516 138 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C PTI1P39927 425 aaPredicted RBP2.33□□□□□ -2.04
TCD1YHR003C YER076CP40049 302 aa2.33□□□□□ -2.04
TCD1YHR003C LSM4P40070 187 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C PEX17P40155 199 aa2.33□□□□□ -2.04
TCD1YHR003C AVT7P40501 490 aa2.33□□□□□ -2.04
TCD1YHR003C CIN5P40917 295 aa2.33□□□□□ -2.04
TCD1YHR003C PRM10P42946 383 aa2.33□□□□□ -2.04
TCD1YHR003C FMP32P43557 207 aa2.33□□□□□ -2.04
TCD1YHR003C UBC12P52491 188 aa2.33□□□□□ -2.04
TCD1YHR003C MPA43P53583 542 aaPredicted RBP2.33□□□□□ -2.04
TCD1YHR003C PET191Q02772 108 aa2.33□□□□□ -2.04
TCD1YHR003C YPR127WQ06494 345 aa2.33□□□□□ -2.04
TCD1YHR003C RRP40Q08285 240 aaKnown RBP2.33□□□□□ -2.04
TCD1YHR003C TMC1Q08422 150 aaPredicted RBP2.33□□□□□ -2.04
TCD1YHR003C SYC1Q08553 188 aaPredicted RBP2.33□□□□□ -2.04
TCD1YHR003C RAX2Q12465 1220 aa2.33□□□□□ -2.04
TCD1YHR003C MEC1P38111 2368 aa2.32□□□□□ -2.04
TCD1YHR003C CCH1P50077 2039 aa2.32□□□□□ -2.04
TCD1YHR003C TRP1P00912 224 aa2.32□□□□□ -2.04
TCD1YHR003C TRX3P25372 127 aa2.32□□□□□ -2.04
TCD1YHR003C APS1P35181 156 aa2.32□□□□□ -2.04
TCD1YHR003C SWD3P38123 315 aa2.32□□□□□ -2.04
TCD1YHR003C YHI9P38765 294 aa2.32□□□□□ -2.04
TCD1YHR003C NVJ1P38881 321 aa2.32□□□□□ -2.04
TCD1YHR003C SEN34P39707 275 aa2.32□□□□□ -2.04
TCD1YHR003C YJR085CP47131 105 aaKnown RBP2.32□□□□□ -2.04
TCD1YHR003C YNL184CP53876 108 aa2.32□□□□□ -2.04
TCD1YHR003C FMP41P53889 259 aaKnown RBP2.32□□□□□ -2.04
TCD1YHR003C LSM7P53905 115 aaKnown RBP2.32□□□□□ -2.04
TCD1YHR003C YPL113CQ02961 396 aa2.32□□□□□ -2.04
TCD1YHR003C MAK3Q03503 176 aa2.32□□□□□ -2.04
TCD1YHR003C YML108WQ03759 105 aa2.32□□□□□ -2.04
TCD1YHR003C VHS1Q03785 461 aa2.32□□□□□ -2.04
TCD1YHR003C PKR1Q03880 122 aaKnown RBP2.32□□□□□ -2.04
TCD1YHR003C PLP1Q04004 230 aa2.32□□□□□ -2.04
TCD1YHR003C YLR177WQ06251 628 aa2.32□□□□□ -2.04
TCD1YHR003C FDH1Q08911 376 aa2.32□□□□□ -2.04
TCD1YHR003C BBP1Q12365 385 aa2.32□□□□□ -2.04
TCD1YHR003C IGO2Q9P305 131 aa2.32□□□□□ -2.04
TCD1YHR003C YCR023CP25351 611 aa2.31□□□□□ -2.04
TCD1YHR003C AHC2P25649 128 aa2.31□□□□□ -2.04
TCD1YHR003C TCA17P32613 152 aa2.31□□□□□ -2.04
TCD1YHR003C SHE1P38200 338 aa2.31□□□□□ -2.04
TCD1YHR003C EFM1P38732 585 aa2.31□□□□□ -2.04
TCD1YHR003C BDH1P39714 382 aa2.31□□□□□ -2.04
TCD1YHR003C YNL208WP40159 199 aaKnown RBP2.31□□□□□ -2.04
TCD1YHR003C PRM5P40476 318 aa2.31□□□□□ -2.04
TCD1YHR003C NCA3P46955 337 aa2.31□□□□□ -2.04
TCD1YHR003C AIM25P47140 327 aa2.31□□□□□ -2.04
TCD1YHR003C BNS1P50084 137 aa2.31□□□□□ -2.04
TCD1YHR003C YGR015CP53208 328 aa2.31□□□□□ -2.04
TCD1YHR003C HSK3P69852 69 aa2.31□□□□□ -2.04
TCD1YHR003C CSN9Q03981 162 aa2.31□□□□□ -2.04
TCD1YHR003C HPT1Q04178 221 aaKnown RBP2.31□□□□□ -2.04
TCD1YHR003C HNT1Q04344 158 aaKnown RBP2.31□□□□□ -2.04
TCD1YHR003C YDR124WQ04608 324 aa2.31□□□□□ -2.04
TCD1YHR003C YLR031WQ07978 186 aa2.31□□□□□ -2.04
TCD1YHR003C YPL257WQ08974 193 aa2.31□□□□□ -2.04
TCD1YHR003C MDM32Q12171 622 aa2.31□□□□□ -2.04
TCD1YHR003C MHT1Q12525 324 aa2.31□□□□□ -2.04
TCD1YHR003C NAG1Q8TGN9 163 aa2.31□□□□□ -2.04
TCD1YHR003C YHR139C-AO13536 103 aa2.3□□□□□ -2.04
TCD1YHR003C SNF4P12904 322 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms