RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	LPP1	Q04396	274 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	MCH1	Q07376	486 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	PST1	Q12355	444 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	GEP5	Q12393	293 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.43	□□□□□ -2.02
YGR039W	YGR039W	YOR020W-A	Q3E824	90 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	TDA8	Q6B2U8	126 aa		2.43	□□□□□ -2.02
YGR039W	YGR039W	SNF4	P12904	322 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	FCY2	P17064	533 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	TRX3	P25372	127 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	RCN1	P36054	211 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	UTP30	P36144	274 aa	Known RBP	2.42	□□□□□ -2.02
YGR039W	YGR039W	TRR2	P38816	342 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	RMD6	P39975	231 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	EDC3	P39998	551 aa	Known RBP	2.42	□□□□□ -2.02
YGR039W	YGR039W	HMF1	P40037	129 aa	Known RBP	2.42	□□□□□ -2.02
YGR039W	YGR039W	LSM4	P40070	187 aa	Known RBP	2.42	□□□□□ -2.02
YGR039W	YGR039W	YGL235W	P53071	178 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	FLC3	P53121	802 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	HST4	P53688	370 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	HSK3	P69852	69 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	HAL1	Q01766	294 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	SLD7	Q08457	257 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	YPL257W	Q08974	193 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	YLR053C	Q12026	108 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	BBP1	Q12365	385 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	PET20	Q99373	253 aa		2.42	□□□□□ -2.02
YGR039W	YGR039W	MBF1	O14467	151 aa	Known RBP	2.41	□□□□□ -2.02
YGR039W	YGR039W	RSM25	P40496	264 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	RSM27	P53305	110 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	ALG9	P53868	555 aa	Known RBP	2.41	□□□□□ -2.02
YGR039W	YGR039W	APJ1	P53940	528 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	GAS3	Q03655	524 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	YMD8	Q03697	442 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	YDR249C	Q03787	373 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	MRX8	Q05473	314 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	YPL162C	Q12042	273 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	RDI1	Q12434	202 aa		2.41	□□□□□ -2.02
YGR039W	YGR039W	YPR170W-B	P0C5R9	85 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	PET9	P18239	318 aa	Known RBP	2.4	□□□□□ -2.03
YGR039W	YGR039W	AHC2	P25649	128 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	KDX1	P36005	433 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	UTH1	P36135	365 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	YBR063C	P38083	404 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	POP4	P38336	279 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	AST2	P39945	430 aa	Known RBP	2.4	□□□□□ -2.03
YGR039W	YGR039W	ICE2	P40499	491 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	FMP32	P43557	207 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	YFH7	P43591	353 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	YFR045W	P43617	309 aa		2.4	□□□□□ -2.03
YGR039W	YGR039W	ARP3	P47117	449 aa	Known RBP	2.4	□□□□□ -2.03
YGR039W	YGR039W	CMD1	P06787	147 aa	Known RBP	2.39	□□□□□ -2.03
YGR039W	YGR039W	RAD10	P06838	210 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	YCR023C	P25351	611 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	UBC8	P28263	218 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	COS8	P38723	381 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	YAR068W	P39564	161 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	GLE2	P40066	365 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	FIS1	P40515	155 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	PFS2	P42841	465 aa	Known RBP	2.39	□□□□□ -2.03
YGR039W	YGR039W	NQM1	P53228	333 aa	Predicted RBP	2.39	□□□□□ -2.03
YGR039W	YGR039W	SWP1	Q02795	286 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	HPT1	Q04178	221 aa	Known RBP	2.39	□□□□□ -2.03
YGR039W	YGR039W	DYN3	Q04949	312 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	YPR127W	Q06494	345 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	ARR2	Q06597	130 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	MCP1	Q12106	302 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	RIO1	Q12196	484 aa	Known RBP	2.39	□□□□□ -2.03
YGR039W	YGR039W	IES3	Q12345	250 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	PEX11	Q12462	236 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	YFR032C-B	Q8TGU2	87 aa		2.39	□□□□□ -2.03
YGR039W	YGR039W	REP2	P03872	296 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	YLR156W	P0CE96	114 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	YLR159W	P0CE97	114 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	YLR161W	P0CE98	114 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	ATG22	P25568	528 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.38	□□□□□ -2.03	not detected
YGR039W	YGR039W	SRP102	P36057	244 aa	Predicted RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	CTR2	P38865	189 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	YFL012W	P43580	148 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	SKI6	P46948	246 aa	Predicted RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	OST2	P46964	130 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	YJR111C	P47148	283 aa	Known RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	MIG2	P53035	382 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	ARO8	P53090	500 aa	Known RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	AIM34	Q03673	198 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	GPI17	Q04080	534 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	TRM12	Q04235	462 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	HNT1	Q04344	158 aa	Known RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	YOR268C	Q08734	132 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	PSF1	Q12488	208 aa		2.38	□□□□□ -2.03
YGR039W	YGR039W	EFG1	Q3E705	233 aa	Known RBP	2.38	□□□□□ -2.03
YGR039W	YGR039W	HIS3	P06633	220 aa		2.37	□□□□□ -2.03
YGR039W	YGR039W	RPS28B	P0C0X0	67 aa	Known RBP	2.37	□□□□□ -2.03
YGR039W	YGR039W	RPS24A	P0CX31	135 aa	Known RBP	2.37	□□□□□ -2.03
YGR039W	YGR039W	RPS24B	P0CX32	135 aa	Known RBP	2.37	□□□□□ -2.03
YGR039W	YGR039W	RPB3	P16370	318 aa	Known RBP	2.37	□□□□□ -2.03
YGR039W	YGR039W	SCO1	P23833	295 aa		2.37	□□□□□ -2.03
YGR039W	YGR039W	YKL102C	P34249	101 aa		2.37	□□□□□ -2.03
YGR039W	YGR039W	MRPS9	P38120	278 aa		2.37	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 70 ms