RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W MRPL39P36533 70 aa5.32□□□□□ -1.56
SNU71YGR013W PTH1P38876 190 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W YNL046WP53956 172 aa5.32□□□□□ -1.56
SNU71YGR013W CRZ1P53968 678 aa5.32□□□□□ -1.56
SNU71YGR013W YMR279CQ03263 540 aa5.32□□□□□ -1.56
SNU71YGR013W PBA1Q05778 276 aa5.32□□□□□ -1.56
SNU71YGR013W RPL25P04456 142 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W NSP1P14907 823 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W ECM31P38122 312 aa5.32□□□□□ -1.56
SNU71YGR013W BAT1P38891 393 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W AVT6P40074 448 aa5.32□□□□□ -1.56
SNU71YGR013W MRPL49P40858 161 aaPredicted RBP5.32□□□□□ -1.56
SNU71YGR013W YJR056CP47115 236 aa5.32□□□□□ -1.56
SNU71YGR013W FDH1Q08911 376 aa5.32□□□□□ -1.56
SNU71YGR013W RPL21BQ12672 160 aaKnown RBP5.32□□□□□ -1.56
SNU71YGR013W IMP1P28627 190 aa5.31□□□□□ -1.56
SNU71YGR013W POP8P38208 133 aa5.31□□□□□ -1.56
SNU71YGR013W RFS1P38234 210 aaKnown RBP5.31□□□□□ -1.56
SNU71YGR013W YFL064CP43540 174 aa5.31□□□□□ -1.56
SNU71YGR013W BXI1P48558 297 aa5.31□□□□□ -1.56
SNU71YGR013W NOC4Q06512 552 aaPredicted RBP5.31□□□□□ -1.56
SNU71YGR013W YOR186WQ08560 144 aa5.31□□□□□ -1.56
SNU71YGR013W HRT3Q12347 344 aa5.31□□□□□ -1.56
SNU71YGR013W RAX2Q12465 1220 aa5.31□□□□□ -1.56
SNU71YGR013W ERD2P18414 219 aa5.3□□□□□ -1.56
SNU71YGR013W OAC1P32332 324 aa5.3□□□□□ -1.56
SNU71YGR013W ECM13P38195 257 aa5.3□□□□□ -1.56
SNU71YGR013W SSH1P38353 490 aaKnown RBP5.3□□□□□ -1.56
SNU71YGR013W ICE2P40499 491 aa5.3□□□□□ -1.56
SNU71YGR013W MRH4P53166 561 aa5.3□□□□□ -1.56
SNU71YGR013W NHP10Q03435 203 aa5.3□□□□□ -1.56
SNU71YGR013W AGC1Q12482 902 aa5.3□□□□□ -1.56
SNU71YGR013W HMT1P38074 348 aa5.3□□□□□ -1.56
SNU71YGR013W TIM17P39515 158 aa5.3□□□□□ -1.56
SNU71YGR013W OXA1P39952 402 aa5.3□□□□□ -1.56
SNU71YGR013W YGL034CP53186 121 aa5.3□□□□□ -1.56
SNU71YGR013W FMP48P53233 369 aa5.3□□□□□ -1.56
SNU71YGR013W ELP3Q02908 557 aaKnown RBP5.3□□□□□ -1.56
SNU71YGR013W YMD8Q03697 442 aa5.3□□□□□ -1.56
SNU71YGR013W RUB1Q03919 77 aa5.3□□□□□ -1.56
SNU71YGR013W HRI1Q05905 244 aaKnown RBP5.3□□□□□ -1.56
SNU71YGR013W GRX8Q05926 109 aa5.3□□□□□ -1.56
SNU71YGR013W YAL063C-AQ3E791 96 aa5.3□□□□□ -1.56
SNU71YGR013W KIN28P06242 306 aa5.29□□□□□ -1.56
SNU71YGR013W CAT2P32796 670 aaKnown RBP5.29□□□□□ -1.56
SNU71YGR013W ECM33P38248 429 aaKnown RBP5.29□□□□□ -1.56
SNU71YGR013W GAA1P39012 614 aa5.29□□□□□ -1.56
SNU71YGR013W SEO1P39709 593 aa5.29□□□□□ -1.56
SNU71YGR013W YIL012WP40551 113 aa5.29□□□□□ -1.56
SNU71YGR013W CCC1P47818 322 aa5.29□□□□□ -1.56
SNU71YGR013W YGR042WP53227 271 aa5.29□□□□□ -1.56
SNU71YGR013W AAH1P53909 347 aa5.29□□□□□ -1.56
SNU71YGR013W IMP4P53941 290 aaKnown RBP5.29□□□□□ -1.56
SNU71YGR013W PEX12Q04370 399 aa5.29□□□□□ -1.56
SNU71YGR013W MSA1Q08471 629 aa5.29□□□□□ -1.56
SNU71YGR013W TIR4Q12218 487 aaPredicted RBP5.29□□□□□ -1.56
SNU71YGR013W RPL22AP05749 121 aaKnown RBP5.28□□□□□ -1.56
SNU71YGR013W SUI1P32911 108 aaKnown RBP5.28□□□□□ -1.56
SNU71YGR013W YOX1P34161 385 aa5.28□□□□□ -1.56
SNU71YGR013W PHO88P38264 188 aaPredicted RBP5.28□□□□□ -1.56
SNU71YGR013W JAC1P53193 184 aa5.28□□□□□ -1.56
SNU71YGR013W RNH201P53942 307 aa5.28□□□□□ -1.56
SNU71YGR013W LIP2Q06005 328 aa5.28□□□□□ -1.56
SNU71YGR013W IRC25Q07951 179 aa5.28□□□□□ -1.56
SNU71YGR013W YOL019WQ08157 551 aa5.28□□□□□ -1.56
SNU71YGR013W NDD1Q08887 554 aa5.28□□□□□ -1.56
SNU71YGR013W FKS1P38631 1876 aaKnown RBP5.28□□□□□ -1.56
SNU71YGR013W COS6P53344 381 aa5.28□□□□□ -1.56
SNU71YGR013W EMP46Q12396 444 aa5.28□□□□□ -1.56
SNU71YGR013W COS2P0CX12 379 aa5.27□□□□□ -1.57
SNU71YGR013W COS3P0CX13 379 aa5.27□□□□□ -1.57
SNU71YGR013W YET1P35723 206 aa5.27□□□□□ -1.57
SNU71YGR013W SOL2P37262 315 aa5.27□□□□□ -1.57
SNU71YGR013W EFM1P38732 585 aa5.27□□□□□ -1.57
SNU71YGR013W PEX17P40155 199 aa5.27□□□□□ -1.57
SNU71YGR013W REE1P40893 198 aa5.27□□□□□ -1.57
SNU71YGR013W COS4P43542 379 aa5.27□□□□□ -1.57
SNU71YGR013W CWC27Q02770 301 aa5.27□□□□□ -1.57
SNU71YGR013W MRX11Q03079 207 aa5.27□□□□□ -1.57
SNU71YGR013W VHS1Q03785 461 aa5.27□□□□□ -1.57
SNU71YGR013W YDR115WQ04598 105 aa5.27□□□□□ -1.57
SNU71YGR013W SYC1Q08553 188 aaPredicted RBP5.27□□□□□ -1.57
SNU71YGR013W ATG22P25568 528 aa5.26□□□□□ -1.57
SNU71YGR013W YKR041WP36134 250 aa5.26□□□□□ -1.57
SNU71YGR013W SOK1P40317 901 aa5.26□□□□□ -1.57
SNU71YGR013W YGR018CP53211 109 aa5.26□□□□□ -1.57
SNU71YGR013W PET191Q02772 108 aa5.26□□□□□ -1.57
SNU71YGR013W YDR248CQ03786 193 aa5.26□□□□□ -1.57
SNU71YGR013W TFC1P32367 649 aa5.26□□□□□ -1.57
SNU71YGR013W PDS1P40316 373 aaPredicted RBP5.26□□□□□ -1.57
SNU71YGR013W FMP32P43557 207 aa5.26□□□□□ -1.57
SNU71YGR013W YGL235WP53071 178 aa5.26□□□□□ -1.57
SNU71YGR013W YDR476CQ03362 224 aa5.26□□□□□ -1.57
SNU71YGR013W YHR139C-AO13536 103 aa5.25□□□□□ -1.57
SNU71YGR013W STF2P16965 84 aa5.25□□□□□ -1.57
SNU71YGR013W AAT2P23542 418 aaKnown RBP5.25□□□□□ -1.57
SNU71YGR013W YBL059WP34224 193 aa5.25□□□□□ -1.57
SNU71YGR013W RPL21AQ02753 160 aaKnown RBP5.25□□□□□ -1.57
SNU71YGR013W YDC1Q02896 317 aa5.25□□□□□ -1.57
SNU71YGR013W YMR244WQ04018 355 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms