RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W GPM2Q12008 311 aa0.7□□□□□ -2.3
SLD3YGL113W SEY1Q99287 776 aa0.7□□□□□ -2.3
SLD3YGL113W ATG40Q99325 256 aa0.7□□□□□ -2.3
SLD3YGL113W RPL28P02406 149 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W YBR121C-AP0C5L4 52 aa0.69□□□□□ -2.3
SLD3YGL113W NHP6BP11633 99 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W TCP1P12612 559 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W YBR285WP38354 144 aa0.69□□□□□ -2.3
SLD3YGL113W BXI1P48558 297 aa0.69□□□□□ -2.3
SLD3YGL113W TRM9P49957 279 aa0.69□□□□□ -2.3
SLD3YGL113W DOC1P53068 250 aa0.69□□□□□ -2.3
SLD3YGL113W FSF1Q12029 327 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W JLP1Q12358 412 aa0.69□□□□□ -2.3
SLD3YGL113W RAS2P01120 322 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W RPL25P04456 142 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W RPL27BP0C2H7 136 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W BET1P22804 142 aa0.69□□□□□ -2.3
SLD3YGL113W RPS5P26783 225 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W PTM1P32857 523 aa0.69□□□□□ -2.3
SLD3YGL113W NTF2P33331 125 aaKnown RBP0.69□□□□□ -2.3
SLD3YGL113W YBR219CP38317 127 aa0.69□□□□□ -2.3
SLD3YGL113W IRC22P40006 225 aa0.69□□□□□ -2.3
SLD3YGL113W IRC18P47056 224 aa0.69□□□□□ -2.3
SLD3YGL113W NUP57P48837 541 aa0.69□□□□□ -2.3
SLD3YGL113W BOL2P53082 120 aa0.69□□□□□ -2.3
SLD3YGL113W NOP13P53883 403 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
SLD3YGL113W MDM32Q12171 622 aa0.69□□□□□ -2.3
SLD3YGL113W STE18P18852 110 aa0.68□□□□□ -2.3
SLD3YGL113W CKS1P20486 150 aaKnown RBP0.68□□□□□ -2.3
SLD3YGL113W UPS2P35200 230 aa0.68□□□□□ -2.3
SLD3YGL113W GVP36P40531 326 aaKnown RBP0.68□□□□□ -2.3
SLD3YGL113W OTU1P43558 301 aa0.68□□□□□ -2.3
SLD3YGL113W ERJ5P43613 295 aaPredicted RBP0.68□□□□□ -2.3
SLD3YGL113W YMR007WQ03675 126 aa0.68□□□□□ -2.3
SLD3YGL113W CUE4Q04201 117 aaPredicted RBP0.68□□□□□ -2.3
SLD3YGL113W YLR162WQ06235 118 aa0.68□□□□□ -2.3
SLD3YGL113W THP2O13539 261 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W YLR156WP0CE96 114 aa0.67□□□□□ -2.3
SLD3YGL113W YLR159WP0CE97 114 aa0.67□□□□□ -2.3
SLD3YGL113W YLR161WP0CE98 114 aa0.67□□□□□ -2.3
SLD3YGL113W KSS1P14681 368 aa0.67□□□□□ -2.3
SLD3YGL113W YMR31P19955 123 aa0.67□□□□□ -2.3
SLD3YGL113W DBF2P22204 572 aa0.67□□□□□ -2.3
SLD3YGL113W TCA17P32613 152 aa0.67□□□□□ -2.3
SLD3YGL113W MRPL17P36528 281 aa0.67□□□□□ -2.3
SLD3YGL113W OPY1P38271 328 aa0.67□□□□□ -2.3
SLD3YGL113W AIM2P39721 246 aa0.67□□□□□ -2.3
SLD3YGL113W EDC3P39998 551 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W HMF1P40037 129 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W RTR1P40084 226 aaPredicted RBP0.67□□□□□ -2.3
SLD3YGL113W GRX5Q02784 150 aa0.67□□□□□ -2.3
SLD3YGL113W RCE1Q03530 315 aa0.67□□□□□ -2.3
SLD3YGL113W BNA7Q04066 261 aa0.67□□□□□ -2.3
SLD3YGL113W YMR226CQ05016 267 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W FUS2Q05670 677 aa0.67□□□□□ -2.3
SLD3YGL113W YHR007C-AQ07074 71 aa0.67□□□□□ -2.3
SLD3YGL113W FLO9P39712 1322 aa0.67□□□□□ -2.3
SLD3YGL113W IKI3Q06706 1349 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W CDC28P00546 298 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W GCN3P14741 305 aa0.67□□□□□ -2.3
SLD3YGL113W COQ1P18900 473 aa0.67□□□□□ -2.3
SLD3YGL113W YPK2P18961 677 aa0.67□□□□□ -2.3
SLD3YGL113W GAA1P39012 614 aa0.67□□□□□ -2.3
SLD3YGL113W TMA22P47089 198 aaPredicted RBP0.67□□□□□ -2.3
SLD3YGL113W POP3P53833 195 aaPredicted RBP0.67□□□□□ -2.3
SLD3YGL113W TRM12Q04235 462 aa0.67□□□□□ -2.3
SLD3YGL113W DYN3Q04949 312 aa0.67□□□□□ -2.3
SLD3YGL113W GGA1Q06336 557 aa0.67□□□□□ -2.3
SLD3YGL113W MSA1Q08471 629 aa0.67□□□□□ -2.3
SLD3YGL113W TUS1Q06412 1307 aa0.67□□□□□ -2.3
SLD3YGL113W CFT1Q06632 1357 aaKnown RBP0.67□□□□□ -2.3
SLD3YGL113W TIM9O74700 87 aa0.66□□□□□ -2.3
SLD3YGL113W CDC36P06100 191 aaPredicted RBP0.66□□□□□ -2.3
SLD3YGL113W CPA1P07258 411 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W MATALPHA1P0CY06 175 aa0.66□□□□□ -2.3
SLD3YGL113W HMLALPHA1P0CY07 175 aa0.66□□□□□ -2.3
SLD3YGL113W PBN1P25580 416 aa0.66□□□□□ -2.3
SLD3YGL113W YCR090CP25654 182 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W NTG1P31378 399 aa0.66□□□□□ -2.3
SLD3YGL113W PRX1P34227 261 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W URA8P38627 578 aaPredicted RBP0.66□□□□□ -2.3
SLD3YGL113W YER034WP40022 185 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W RIO2P40160 425 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W RFC4P40339 323 aaKnown RBP0.66□□□□□ -2.3
SLD3YGL113W MGA1P53050 456 aa0.66□□□□□ -2.3
SLD3YGL113W PGA2P53903 129 aa0.66□□□□□ -2.3
SLD3YGL113W MRPS17Q03246 237 aaPredicted RBP0.66□□□□□ -2.3
SLD3YGL113W GAS3Q03655 524 aa0.66□□□□□ -2.3
SLD3YGL113W CSI2Q08054 341 aa0.66□□□□□ -2.3
SLD3YGL113W TDA8Q6B2U8 126 aa0.66□□□□□ -2.3
SLD3YGL113W ODC2Q99297 307 aa0.66□□□□□ -2.3
SLD3YGL113W SIR2P06700 562 aa0.65□□□□□ -2.3
SLD3YGL113W RHO1P06780 209 aaKnown RBP0.65□□□□□ -2.3
SLD3YGL113W SEC4P07560 215 aaKnown RBP0.65□□□□□ -2.3
SLD3YGL113W RPL2AP0CX45 254 aaKnown RBP0.65□□□□□ -2.3
SLD3YGL113W RPL2BP0CX46 254 aaKnown RBP0.65□□□□□ -2.3
SLD3YGL113W RPB4P20433 221 aaPredicted RBP0.65□□□□□ -2.3
SLD3YGL113W IDH1P28834 360 aaKnown RBP RIP-Chip data0.65□□□□□ -2.3not detected
SLD3YGL113W SIP3P38717 1229 aa0.65□□□□□ -2.3
SLD3YGL113W YER076CP40049 302 aa0.65□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms