RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YHR022CP38763 256 aa2.52□□□□□ -2.01
SCL1YGL011C YKE4P40544 346 aa2.52□□□□□ -2.01
SCL1YGL011C AIF1P52923 378 aa2.52□□□□□ -2.01
SCL1YGL011C YIL177CP40434 1758 aa2.51□□□□□ -2.01
SCL1YGL011C YJL225CP40889 1758 aa2.51□□□□□ -2.01
SCL1YGL011C AYR1P40471 297 aa2.51□□□□□ -2.01
SCL1YGL011C BMT5P40493 336 aa2.51□□□□□ -2.01
SCL1YGL011C YNR062CP53748 327 aa2.51□□□□□ -2.01
SCL1YGL011C USB1Q12208 290 aaKnown RBP2.51□□□□□ -2.01
SCL1YGL011C BOL1Q3E793 110 aa2.51□□□□□ -2.01
SCL1YGL011C MEI4P29467 408 aa2.5□□□□□ -2.01
SCL1YGL011C YKT6P36015 200 aaKnown RBP2.5□□□□□ -2.01
SCL1YGL011C RPL33BP41056 107 aaKnown RBP2.5□□□□□ -2.01
SCL1YGL011C ERG25P53045 309 aa2.5□□□□□ -2.01
SCL1YGL011C PDR17P53844 350 aa2.5□□□□□ -2.01
SCL1YGL011C SNZ1Q03148 297 aa2.5□□□□□ -2.01
SCL1YGL011C TLG1Q03322 224 aa2.5□□□□□ -2.01
SCL1YGL011C TUS1Q06412 1307 aa2.49□□□□□ -2.01
SCL1YGL011C DDI2P0CH63 225 aa2.49□□□□□ -2.01
SCL1YGL011C DDI3P0CH64 225 aa2.49□□□□□ -2.01
SCL1YGL011C GCN3P14741 305 aa2.49□□□□□ -2.01
SCL1YGL011C PET9P18239 318 aaKnown RBP2.49□□□□□ -2.01
SCL1YGL011C IDH1P28834 360 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SCL1YGL011C SPS18P32572 300 aa2.49□□□□□ -2.01
SCL1YGL011C LSM4P40070 187 aaKnown RBP2.49□□□□□ -2.01
SCL1YGL011C PGD1P40356 397 aa2.49□□□□□ -2.01
SCL1YGL011C BAT2P47176 376 aaKnown RBP2.49□□□□□ -2.01
SCL1YGL011C TCB3Q03640 1545 aaKnown RBP2.48□□□□□ -2.01
SCL1YGL011C SEC4P07560 215 aaKnown RBP2.48□□□□□ -2.01
SCL1YGL011C MGM101P32787 269 aaKnown RBP2.48□□□□□ -2.01
SCL1YGL011C IRC18P47056 224 aa2.48□□□□□ -2.01
SCL1YGL011C PET191Q02772 108 aa2.48□□□□□ -2.01
SCL1YGL011C YHR214C-EQ8TGK0 99 aa2.48□□□□□ -2.01
SCL1YGL011C SKI3P17883 1432 aaKnown RBP2.48□□□□□ -2.01
SCL1YGL011C SEC17P32602 292 aa2.47□□□□□ -2.01
SCL1YGL011C UTP30P36144 274 aaKnown RBP2.47□□□□□ -2.01
SCL1YGL011C PEP8P40335 379 aa2.47□□□□□ -2.01
SCL1YGL011C CDC7P06243 507 aa2.46□□□□□ -2.02
SCL1YGL011C RFA3P26755 122 aaKnown RBP2.46□□□□□ -2.02
SCL1YGL011C PTM1P32857 523 aa2.46□□□□□ -2.02
SCL1YGL011C MRPL28P36527 147 aa2.46□□□□□ -2.02
SCL1YGL011C IKI1P38874 309 aa2.46□□□□□ -2.02
SCL1YGL011C ICE2P40499 491 aa2.46□□□□□ -2.02
SCL1YGL011C AGE2P40529 298 aa2.46□□□□□ -2.02
SCL1YGL011C YFR054CP43622 192 aa2.46□□□□□ -2.02
SCL1YGL011C YGR050CP53231 118 aa2.46□□□□□ -2.02
SCL1YGL011C SWP1Q02795 286 aa2.46□□□□□ -2.02
SCL1YGL011C MCP1Q12106 302 aa2.46□□□□□ -2.02
SCL1YGL011C HTB1P02293 131 aaKnown RBP2.45□□□□□ -2.02
SCL1YGL011C HTB2P02294 131 aa2.45□□□□□ -2.02
SCL1YGL011C YCR087C-AP37263 153 aa2.45□□□□□ -2.02
SCL1YGL011C DSE2P38844 325 aa2.45□□□□□ -2.02
SCL1YGL011C RMD6P39975 231 aa2.45□□□□□ -2.02
SCL1YGL011C BOL2P53082 120 aa2.45□□□□□ -2.02
SCL1YGL011C CWC21Q03375 135 aaKnown RBP2.45□□□□□ -2.02
SCL1YGL011C YPL162CQ12042 273 aa2.45□□□□□ -2.02
SCL1YGL011C YRA1Q12159 226 aaKnown RBP2.45□□□□□ -2.02
SCL1YGL011C RPL27BP0C2H7 136 aaKnown RBP2.44□□□□□ -2.02
SCL1YGL011C MRPS28P21771 286 aa2.44□□□□□ -2.02
SCL1YGL011C MRPL17P36528 281 aa2.44□□□□□ -2.02
SCL1YGL011C SVP26P38869 228 aa2.44□□□□□ -2.02
SCL1YGL011C YRB2P40517 327 aa2.44□□□□□ -2.02
SCL1YGL011C TIR3P40552 269 aa2.44□□□□□ -2.02
SCL1YGL011C ADF1Q2V2Q1 113 aa2.44□□□□□ -2.02
SCL1YGL011C TIM9O74700 87 aa2.43□□□□□ -2.02
SCL1YGL011C MER1P16523 270 aa2.43□□□□□ -2.02
SCL1YGL011C CBF1P17106 351 aa2.43□□□□□ -2.02
SCL1YGL011C MDH2P22133 377 aa2.43□□□□□ -2.02
SCL1YGL011C SKG1P36169 355 aa2.43□□□□□ -2.02
SCL1YGL011C AST2P39945 430 aaKnown RBP2.43□□□□□ -2.02
SCL1YGL011C VTC1P40046 129 aaRIP-Chip data2.43□□□□□ -2.02not detected
SCL1YGL011C DOC1P53068 250 aa2.43□□□□□ -2.02
SCL1YGL011C YNR077CP53758 84 aa2.43□□□□□ -2.02
SCL1YGL011C CUS2P53830 285 aaPredicted RBP2.43□□□□□ -2.02
SCL1YGL011C LSM7P53905 115 aaKnown RBP2.43□□□□□ -2.02
SCL1YGL011C TSC3Q3E790 80 aa2.43□□□□□ -2.02
SCL1YGL011C RFC4P40339 323 aaKnown RBP2.42□□□□□ -2.02
SCL1YGL011C YCL012CQ8J0M4 134 aa2.42□□□□□ -2.02
SCL1YGL011C YFR032C-BQ8TGU2 87 aa2.42□□□□□ -2.02
SCL1YGL011C PDR18P53756 1333 aa2.42□□□□□ -2.02
SCL1YGL011C MATALPHA2P0CY08 210 aa2.41□□□□□ -2.02
SCL1YGL011C HMLALPHA2P0CY09 210 aa2.41□□□□□ -2.02
SCL1YGL011C KSS1P14681 368 aa2.41□□□□□ -2.02
SCL1YGL011C YDR249CQ03787 373 aa2.41□□□□□ -2.02
SCL1YGL011C SML1Q04964 104 aa2.41□□□□□ -2.02
SCL1YGL011C YOL160WQ08321 113 aa2.41□□□□□ -2.02
SCL1YGL011C UMP1P38293 148 aa2.4□□□□□ -2.03
SCL1YGL011C YNL217WP40152 326 aa2.4□□□□□ -2.03
SCL1YGL011C YMR226CQ05016 267 aaKnown RBP2.4□□□□□ -2.03
SCL1YGL011C RPL25P04456 142 aaKnown RBP2.39□□□□□ -2.03
SCL1YGL011C FZF1P32805 299 aa2.39□□□□□ -2.03
SCL1YGL011C TRM5P38793 499 aa2.39□□□□□ -2.03
SCL1YGL011C AVT2P39981 480 aa2.39□□□□□ -2.03
SCL1YGL011C YNG1Q08465 219 aa2.39□□□□□ -2.03
SCL1YGL011C SPA2P23201 1466 aaKnown RBP2.39□□□□□ -2.03
SCL1YGL011C BET1P22804 142 aa2.38□□□□□ -2.03
SCL1YGL011C YET1P35723 206 aa2.38□□□□□ -2.03
SCL1YGL011C GVP36P40531 326 aaKnown RBP2.38□□□□□ -2.03
SCL1YGL011C EAF6P47128 113 aa2.38□□□□□ -2.03
SCL1YGL011C COG5P53951 403 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms