RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YOL163WP0CF20 169 aa3.59□□□□□ -1.83
DEG1YFL001W TRR2P38816 342 aa3.59□□□□□ -1.83
DEG1YFL001W YER189WP40104 122 aa3.59□□□□□ -1.83
DEG1YFL001W BMT5P40493 336 aa3.59□□□□□ -1.83
DEG1YFL001W HYR1P40581 163 aaKnown RBP3.59□□□□□ -1.83
DEG1YFL001W RTC4P53850 401 aa3.59□□□□□ -1.83
DEG1YFL001W MSA1Q08471 629 aa3.59□□□□□ -1.83
DEG1YFL001W RIO1Q12196 484 aaKnown RBP3.59□□□□□ -1.83
DEG1YFL001W PRR2Q12310 699 aa3.59□□□□□ -1.83
DEG1YFL001W EMP46Q12396 444 aa3.59□□□□□ -1.83
DEG1YFL001W MRX4Q12467 430 aa3.59□□□□□ -1.83
DEG1YFL001W YPL247CQ12523 523 aa3.59□□□□□ -1.83
DEG1YFL001W MET2P08465 486 aa3.58□□□□□ -1.84
DEG1YFL001W SFC1P33303 322 aa3.58□□□□□ -1.84
DEG1YFL001W PHO88P38264 188 aaPredicted RBP3.58□□□□□ -1.84
DEG1YFL001W PEX17P40155 199 aa3.58□□□□□ -1.84
DEG1YFL001W YFR045WP43617 309 aa3.58□□□□□ -1.84
DEG1YFL001W SYF2P53277 215 aaPredicted RBP3.58□□□□□ -1.84
DEG1YFL001W ECM11Q04110 302 aa3.58□□□□□ -1.84
DEG1YFL001W FAR8Q05040 523 aa3.58□□□□□ -1.84
DEG1YFL001W YOL019WQ08157 551 aa3.58□□□□□ -1.84
DEG1YFL001W BRX1Q08235 291 aaKnown RBP3.58□□□□□ -1.84
DEG1YFL001W IES3Q12345 250 aa3.58□□□□□ -1.84
DEG1YFL001W CMC2Q3E7A4 109 aa3.58□□□□□ -1.84
DEG1YFL001W SOD1P00445 154 aaKnown RBP3.57□□□□□ -1.84
DEG1YFL001W CDC28P00546 298 aaKnown RBP3.57□□□□□ -1.84
DEG1YFL001W SEN2P16658 377 aa3.57□□□□□ -1.84
DEG1YFL001W DBF2P22204 572 aa3.57□□□□□ -1.84
DEG1YFL001W ATP7P30902 174 aa3.57□□□□□ -1.84
DEG1YFL001W YCR087C-AP37263 153 aa3.57□□□□□ -1.84
DEG1YFL001W RSM25P40496 264 aa3.57□□□□□ -1.84
DEG1YFL001W HST4P53688 370 aa3.57□□□□□ -1.84
DEG1YFL001W PDR17P53844 350 aa3.57□□□□□ -1.84
DEG1YFL001W SUE1Q06524 206 aa3.57□□□□□ -1.84
DEG1YFL001W COX5AP00424 153 aa3.56□□□□□ -1.84
DEG1YFL001W MID2P36027 376 aa3.56□□□□□ -1.84
DEG1YFL001W TRM5P38793 499 aa3.56□□□□□ -1.84
DEG1YFL001W ILM1P47155 203 aa3.56□□□□□ -1.84
DEG1YFL001W BXI1P48558 297 aa3.56□□□□□ -1.84
DEG1YFL001W FLC3P53121 802 aa3.56□□□□□ -1.84
DEG1YFL001W ARR2Q06597 130 aa3.56□□□□□ -1.84
DEG1YFL001W SLD7Q08457 257 aa3.56□□□□□ -1.84
DEG1YFL001W PST1Q12355 444 aa3.56□□□□□ -1.84
DEG1YFL001W GSC2P40989 1895 aa3.56□□□□□ -1.84
DEG1YFL001W RPL22AP05749 121 aaKnown RBP3.55□□□□□ -1.84
DEG1YFL001W ZWF1P11412 505 aaKnown RBP3.55□□□□□ -1.84
DEG1YFL001W SEC22P22214 214 aa3.55□□□□□ -1.84
DEG1YFL001W TOM40P23644 387 aaKnown RBP3.55□□□□□ -1.84
DEG1YFL001W EGD2P38879 174 aaKnown RBP3.55□□□□□ -1.84
DEG1YFL001W YIL001WP40560 513 aa3.55□□□□□ -1.84
DEG1YFL001W MDM34P53083 459 aa3.55□□□□□ -1.84
DEG1YFL001W DIA1P54005 336 aa3.55□□□□□ -1.84
DEG1YFL001W YLR179CQ06252 201 aaKnown RBP3.55□□□□□ -1.84
DEG1YFL001W NOT5Q12514 560 aaPredicted RBP3.55□□□□□ -1.84
DEG1YFL001W YHR139C-AO13536 103 aa3.54□□□□□ -1.84
DEG1YFL001W YLR462WO13556 202 aa3.54□□□□□ -1.84
DEG1YFL001W RNP1P32385 249 aa3.54□□□□□ -1.84
DEG1YFL001W SPS18P32572 300 aa3.54□□□□□ -1.84
DEG1YFL001W POP7P38291 140 aa3.54□□□□□ -1.84
DEG1YFL001W GAA1P39012 614 aa3.54□□□□□ -1.84
DEG1YFL001W YEL075CP39972 122 aa3.54□□□□□ -1.84
DEG1YFL001W HMF1P40037 129 aaKnown RBP3.54□□□□□ -1.84
DEG1YFL001W CAT5P41735 233 aa3.54□□□□□ -1.84
DEG1YFL001W RMR1P53060 241 aa3.54□□□□□ -1.84
DEG1YFL001W ALG9P53868 555 aaKnown RBP3.54□□□□□ -1.84
DEG1YFL001W YDR248CQ03786 193 aa3.54□□□□□ -1.84
DEG1YFL001W CDD1Q06549 142 aa3.54□□□□□ -1.84
DEG1YFL001W DDP1Q99321 188 aaKnown RBP3.54□□□□□ -1.84
DEG1YFL001W IPP1P00817 287 aaKnown RBP3.53□□□□□ -1.84
DEG1YFL001W OAC1P32332 324 aa3.53□□□□□ -1.84
DEG1YFL001W PRY2P36110 329 aa3.53□□□□□ -1.84
DEG1YFL001W GRE3P38715 327 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
DEG1YFL001W FAR7P43592 221 aa3.53□□□□□ -1.84
DEG1YFL001W ERV29P53337 310 aa3.53□□□□□ -1.84
DEG1YFL001W YMR279CQ03263 540 aa3.53□□□□□ -1.84
DEG1YFL001W FCF1Q05498 189 aaPredicted RBP3.53□□□□□ -1.84
DEG1YFL001W GPM2Q12008 311 aa3.53□□□□□ -1.84
DEG1YFL001W GCN3P14741 305 aa3.52□□□□□ -1.85
DEG1YFL001W RME1P32338 300 aaKnown RBP3.52□□□□□ -1.85
DEG1YFL001W APS1P35181 156 aa3.52□□□□□ -1.85
DEG1YFL001W TVP38P36164 337 aa3.52□□□□□ -1.85
DEG1YFL001W MAK5P38112 773 aaPredicted RBP3.52□□□□□ -1.85
DEG1YFL001W MIG2P53035 382 aa3.52□□□□□ -1.85
DEG1YFL001W YGL159WP53110 370 aa3.52□□□□□ -1.85
DEG1YFL001W YML108WQ03759 105 aa3.52□□□□□ -1.85
DEG1YFL001W FUS2Q05670 677 aa3.52□□□□□ -1.85
DEG1YFL001W YLR030WQ07967 263 aa3.52□□□□□ -1.85
DEG1YFL001W LSO2Q3E772 92 aaKnown RBP3.52□□□□□ -1.85
DEG1YFL001W HTL1Q9URQ5 78 aa3.52□□□□□ -1.85
DEG1YFL001W ERG24P32462 438 aaKnown RBP3.51□□□□□ -1.85
DEG1YFL001W AST1P35183 429 aa3.51□□□□□ -1.85
DEG1YFL001W YPT52P36018 234 aaKnown RBP3.51□□□□□ -1.85
DEG1YFL001W SEC72P39742 193 aaKnown RBP3.51□□□□□ -1.85
DEG1YFL001W MMS2P53152 137 aa3.51□□□□□ -1.85
DEG1YFL001W DID2P69771 204 aa3.51□□□□□ -1.85
DEG1YFL001W SPC2Q04969 178 aa3.51□□□□□ -1.85
DEG1YFL001W GEP5Q12393 293 aa3.51□□□□□ -1.85
DEG1YFL001W SGA1P08019 549 aa3.5□□□□□ -1.85
DEG1YFL001W TKL2P33315 681 aa3.5□□□□□ -1.85
DEG1YFL001W MSA2P36157 363 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms