RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	YPR117W	Q06116	2489 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	SCEI	P03882	235 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	CDC36	P06100	191 aa	Predicted RBP	4.1	□□□□□ -1.75
RVB1	YDR190C	MSK1	P32048	576 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	SOF1	P33750	489 aa	Known RBP	4.1	□□□□□ -1.75
RVB1	YDR190C	YKL162C	P36052	402 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	ARC40	P38328	384 aa	Known RBP	4.1	□□□□□ -1.75
RVB1	YDR190C	SDH8	P38345	138 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	YEA6	P39953	335 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	YND1	P40009	630 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	RFC2	P40348	353 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	REE1	P40893	198 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	CUP9	P41817	306 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	CTK2	P46962	323 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	MRX5	P47007	382 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	YJR056C	P47115	236 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	ADO1	P47143	340 aa	Known RBP	4.1	□□□□□ -1.75
RVB1	YDR190C	PGU1	P47180	361 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	PKP2	P53170	491 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	ACT1	P60010	375 aa	Known RBP	4.1	□□□□□ -1.75
RVB1	YDR190C	MRP51	Q02950	344 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	YLR456W	Q06199	204 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	RKI1	Q12189	258 aa		4.1	□□□□□ -1.75
RVB1	YDR190C	TDH1	P00360	332 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	IPP1	P00817	287 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	QCR2	P07257	368 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	RPS16A	P0CX51	143 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	RPS16B	P0CX52	143 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	YHR214C-D	P0CX93	97 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	NAM2	P11325	894 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	MDH2	P22133	377 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	MIR1	P23641	311 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	RFA3	P26755	122 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	AFG1	P32317	509 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	SWD2	P36104	329 aa	Predicted RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	PRS3	P38689	320 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	GPI16	P38875	610 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	LNP1	P38878	278 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	NSE4	P43124	402 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	MOB2	P43563	287 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	CGR1	P53188	120 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	NRM1	P53718	249 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	YCL001W-A	P87012	153 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	YPL039W	Q03080	316 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	ADD37	Q03233	198 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	MIX14	Q04341	121 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	DXO1	Q06349	442 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	YOR376W	Q08900	122 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	NIP7	Q08962	181 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	PRS5	Q12265	496 aa	Known RBP	4.09	□□□□□ -1.75
RVB1	YDR190C	YBR255C-A	Q3E776	120 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	YIL002W-A	Q3E7Z5	69 aa		4.09	□□□□□ -1.75
RVB1	YDR190C	YLR302C	O13544	120 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	COX1	P00401	534 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	CDC28	P00546	298 aa	Known RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	YML003W	P0CF16	290 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	SPO7	P18410	259 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	IFM1	P25038	676 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	GLC7	P32598	312 aa	Known RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	MNS1	P32906	549 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	DAD2	P36162	133 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	QRI1	P43123	477 aa	Known RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	GNA1	P43577	159 aa	Predicted RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	GWT1	P47026	490 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	MSY1	P48527	492 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	NSA1	P53136	463 aa	Predicted RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	SLX9	P53251	210 aa	Predicted RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	GPI15	P53961	229 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	SDC1	Q03323	175 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	TRS23	Q03784	219 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	ERP1	Q05359	219 aa	Known RBP	4.08	□□□□□ -1.76
RVB1	YDR190C	TGS1	Q12052	315 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	YCT1	Q12235	531 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	HUT1	Q12520	339 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	YPR145C-A	Q2V2P0	78 aa		4.08	□□□□□ -1.76
RVB1	YDR190C	FMP27	Q06179	2628 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	GDH1	P07262	454 aa	Known RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	RPL30	P14120	105 aa	Known RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	ELO2	P25358	347 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	FLO5	P38894	1075 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	PGD1	P40356	397 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	YIL169C	P40442	995 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	HHO1	P53551	258 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	YNR048W	P53740	393 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	APJ1	P53940	528 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	RSM23	Q01163	450 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	DIG2	Q03373	323 aa	Known RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	YDR415C	Q04033	374 aa	Predicted RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	TSA2	Q04120	196 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	YMR253C	Q04835	414 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	SDO1	Q07953	250 aa	Known RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	YOR015W	Q12169	119 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	MED4	Q12343	284 aa		4.07	□□□□□ -1.76
RVB1	YDR190C	SNU23	Q12368	194 aa	Predicted RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	ERG27	Q12452	347 aa	Known RBP	4.07	□□□□□ -1.76
RVB1	YDR190C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RVB1	YDR190C	ERG8	P24521	451 aa		4.06	□□□□□ -1.76
RVB1	YDR190C	OCH1	P31755	480 aa		4.06	□□□□□ -1.76
RVB1	YDR190C	HMX1	P32339	317 aa		4.06	□□□□□ -1.76
RVB1	YDR190C	ERG2	P32352	222 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 132.3 ms