RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	YOR015W	Q12169	119 aa		4.66	□□□□□ -1.66
DBF4	YDR052C	ADH1	P00330	348 aa	Known RBP	4.65	□□□□□ -1.67
DBF4	YDR052C	TKL1	P23254	680 aa	Known RBP	4.65	□□□□□ -1.67
DBF4	YDR052C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
DBF4	YDR052C	ARO4	P32449	370 aa	Known RBP	4.65	□□□□□ -1.67
DBF4	YDR052C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
DBF4	YDR052C	CBP4	P37267	147 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	DER1	P38307	211 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	PAC2	P39937	518 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	YNL034W	P53963	612 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	HHT1	P61830	136 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	ELP6	Q04868	273 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	DIC1	Q06143	298 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	ARR3	Q06598	404 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	PRP11	Q07350	266 aa	Predicted RBP	4.65	□□□□□ -1.67
DBF4	YDR052C	ACK1	Q07622	623 aa	Predicted RBP	4.65	□□□□□ -1.67
DBF4	YDR052C	YOR385W	Q08909	290 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	Q0010	Q9ZZX9	128 aa		4.65	□□□□□ -1.67
DBF4	YDR052C	POR1	P04840	283 aa	Known RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	SLY41	P22215	453 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YKL102C	P34249	101 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	THI2	P38141	450 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	REG2	P38232	338 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	ACA1	P39970	489 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YJR120W	P47157	116 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	BIO5	P53744	561 aa	Known RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	YLR460C	P54007	376 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	TGL2	P54857	326 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	ELP4	Q02884	456 aa	Known RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	PRM3	Q08931	133 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	ICT1	Q12385	394 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	IZH2	Q12442	317 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YLR146W-A	Q2V2P1	62 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	ADK1	P07170	222 aa	Known RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	CDC43	P18898	376 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YMC1	P32331	307 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	PRP18	P33411	251 aa	Predicted RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	ECM33	P38248	429 aa	Known RBP	4.64	□□□□□ -1.67
DBF4	YDR052C	UBS1	P38290	277 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	TRR2	P38816	342 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	FLO5	P38894	1075 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	PEX7	P39108	375 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YEL028W	P39989	153 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YJL028W	P47062	111 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YGL235W	P53071	178 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YGR015C	P53208	328 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	PAU12	P53343	120 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YML083C	Q04526	418 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	YPR114W	Q06107	315 aa		4.64	□□□□□ -1.67
DBF4	YDR052C	BNI1	P41832	1953 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	CUP2	P15315	225 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	MCK1	P21965	375 aa	Known RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	DCG1	P32460	244 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	RPL14A	P36105	138 aa	Known RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	MRP21	P38175	177 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	UMP1	P38293	148 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	RPL14B	P38754	138 aa	Known RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	DLS1	P40366	167 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	TTI2	P47168	421 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	MPP6	P53725	186 aa	Predicted RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	YNL165W	P53891	406 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	YNL140C	P53910	189 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	ARA2	Q04212	335 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	SDH7	Q04401	133 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	PAM18	Q07914	168 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	YOL024W	Q08172	172 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	PMD1	P32634	1753 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	SEC4	P07560	215 aa	Known RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	MRP49	P32388	137 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	PAU16	P35994	123 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	YND1	P40009	630 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	YFL065C	P43539	102 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	HSV2	P50079	448 aa	Predicted RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	ERG26	P53199	349 aa	Known RBP	4.63	□□□□□ -1.67
DBF4	YDR052C	PDR17	P53844	350 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	DUG3	P53871	357 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	ASM4	Q05166	528 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	YPR203W	Q08994	102 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	MCT1	Q12283	360 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	PCL9	Q12477	304 aa		4.63	□□□□□ -1.67
DBF4	YDR052C	HVG1	P0CE11	249 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	ERG24	P32462	438 aa	Known RBP	4.62	□□□□□ -1.67
DBF4	YDR052C	PAU2	P32612	120 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	YOR062C	P36025	268 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	MRPL24	P36525	258 aa	Predicted RBP	4.62	□□□□□ -1.67
DBF4	YDR052C	OXA1	P39952	402 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	ERG28	P40030	148 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	YER134C	P40081	178 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	PMT3	P47190	753 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	TIS11	P47977	285 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	MTM1	P53320	366 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	MET31	Q03081	177 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	YMR166C	Q03829	368 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	ENB1	Q08299	606 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	NDD1	Q08887	554 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	MCP1	Q12106	302 aa		4.62	□□□□□ -1.67
DBF4	YDR052C	RPL7B	Q12213	244 aa	Known RBP	4.62	□□□□□ -1.67
DBF4	YDR052C	DPM1	P14020	267 aa	Known RBP	4.61	□□□□□ -1.67
DBF4	YDR052C	PCL1	P24867	279 aa		4.61	□□□□□ -1.67
DBF4	YDR052C	HSP10	P38910	106 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms