RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	ERV15	P38312	142 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	PRS2	P38620	318 aa	Known RBP	6.08	□□□□□ -1.44
CDC7	YDL017W	YER084W	P40057	128 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	YIL029C	P40538	142 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	YJR012C	P47087	207 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	HNT2	P49775	206 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	YIF1	P53845	314 aa	Known RBP	6.08	□□□□□ -1.44
CDC7	YDL017W	MRPL22	P53881	309 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	MPD1	Q12404	318 aa	Known RBP	6.08	□□□□□ -1.44
CDC7	YDL017W	PCC1	Q3E833	88 aa		6.08	□□□□□ -1.44
CDC7	YDL017W	RPL7A	P05737	244 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	MRP2	P10663	115 aa	Predicted RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	CDC39	P25655	2108 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	ISC10	P32645	267 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	PAC2	P39937	518 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	RPS26A	P39938	119 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	RPS26B	P39939	119 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	YEA4	P40004	342 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	RFC2	P40348	353 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	FLX1	P40464	311 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	PRM5	P40476	318 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	SEC24	P40482	926 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	AIR1	P40507	360 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	CAF16	P43569	289 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	MRX5	P47007	382 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	YIP5	P53108	310 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	MEH1	Q02205	184 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	YPR098C	Q06089	161 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	PIN3	Q06449	215 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	RAF1	Q06891	181 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	FIT3	Q08907	204 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	RPL7B	Q12213	244 aa	Known RBP	6.07	□□□□□ -1.44
CDC7	YDL017W	HUG1	Q6Q5K6	68 aa		6.07	□□□□□ -1.44
CDC7	YDL017W	IMP1	P28627	190 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	YUH1	P35127	236 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	MOH1	P38191	138 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	YEL057C	P39983	233 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	QRI1	P43123	477 aa	Known RBP	6.06	□□□□□ -1.44
CDC7	YDL017W	YMR279C	Q03263	540 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	TSA2	Q04120	196 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	YMR254C	Q04838	102 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	RRS1	Q08746	203 aa	Known RBP	6.06	□□□□□ -1.44
CDC7	YDL017W	ATP16	Q12165	160 aa		6.06	□□□□□ -1.44
CDC7	YDL017W	MET3	P08536	511 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	CUP1-1	P0CX80	61 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	CUP1-2	P0CX81	61 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	ECM31	P38122	312 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	NTC20	P38302	140 aa	Predicted RBP	6.05	□□□□□ -1.44
CDC7	YDL017W	SHG1	P38337	142 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	SPC25	P40014	221 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	PHB1	P40961	287 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	EGT2	P42835	1041 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	YJR056C	P47115	236 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	CAF40	P53829	373 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	MRPS17	Q03246	237 aa	Predicted RBP	6.05	□□□□□ -1.44
CDC7	YDL017W	YDR415C	Q04033	374 aa	Predicted RBP	6.05	□□□□□ -1.44
CDC7	YDL017W	YMR082C	Q04276	118 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	ASM4	Q05166	528 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	YOL118C	Q08259	102 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	WHI5	Q12416	295 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	COX19	Q3E731	98 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	YOR192C-C	Q3E736	78 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	COA2	Q3E823	68 aa		6.05	□□□□□ -1.44
CDC7	YDL017W	YML003W	P0CF16	290 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	SIP1	P32578	815 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	SLM6	P38343	150 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	YMR262W	P38430	313 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	IKI1	P38874	309 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	HHO1	P53551	258 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	MSO1	P53604	210 aa	Known RBP	6.04	□□□□□ -1.44
CDC7	YDL017W	SKO1	Q02100	647 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	YOL029C	Q08187	201 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	AIM45	Q12480	344 aa	Known RBP	6.04	□□□□□ -1.44
CDC7	YDL017W	ATG40	Q99325	256 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	GDH1	P07262	454 aa	Known RBP	6.04	□□□□□ -1.44
CDC7	YDL017W	PIG2	P40187	538 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	POG1	P40473	351 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	SIP18	P50263	79 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	YDC1	Q02896	317 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	HED1	Q03937	162 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	HOF1	Q05080	669 aa		6.04	□□□□□ -1.44
CDC7	YDL017W	ALG6	Q12001	544 aa	Known RBP	6.04	□□□□□ -1.44
CDC7	YDL017W	HEM4	P06174	275 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	CLB6	P32943	380 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	TOK1	P40310	691 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	SLM1	P40485	686 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	TAF4	P50105	388 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	YPL077C	Q02831	240 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	SNO1	Q03144	224 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	ADD37	Q03233	198 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	TMA23	Q03525	211 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	YMR090W	Q04304	227 aa	Known RBP	6.03	□□□□□ -1.44
CDC7	YDL017W	FIT1	Q04433	528 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	DPB4	Q04603	196 aa	Known RBP	6.03	□□□□□ -1.44
CDC7	YDL017W	UPS1	Q05776	175 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	PAM18	Q07914	168 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	YOL024W	Q08172	172 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	YOR292C	Q08743	309 aa		6.03	□□□□□ -1.44
CDC7	YDL017W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.02	□□□□□ -1.45
CDC7	YDL017W	TY1A-DR6	P0CX70	440 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms