RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCS60	YBR222C	CPR7	P47103	393 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	OST3	P48439	350 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	MUP1	P50276	574 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YNR048W	P53740	393 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YVH1	Q02256	364 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	UPS3	Q04006	179 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YMR087W	Q04299	284 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	TAZ1	Q06510	381 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	MCP1	Q12106	302 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	RPL7B	Q12213	244 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	YOR338W	Q99326	363 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	IGO2	Q9P305	131 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	RPL11A	P0C0W9	174 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	SAM35	P14693	329 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	PMU1	P36069	295 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YHL049C	P38722	271 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YEA4	P40004	342 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	SNM1	P40993	198 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	EGT2	P42835	1041 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	LCB3	P47013	409 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	PRM8	P53174	237 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YNL095C	P53932	642 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YPL062W	Q02781	134 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	LEE1	Q02799	301 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	YMR099C	Q03161	297 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	YMR178W	Q03219	274 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	MSS11	Q03825	758 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	YDR415C	Q04033	374 aa	Predicted RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	VBA1	Q04301	562 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	UTP15	Q04305	513 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	SEN15	Q04675	128 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	PBP4	Q07362	185 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	THP1	Q08231	455 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	RDL2	Q08742	149 aa	Known RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	LAS17	Q12446	633 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	RPL11B	Q3E757	174 aa	Predicted RBP	5.19	□□□□□ -1.58
PCS60	YBR222C	BOL1	Q3E793	110 aa		5.19	□□□□□ -1.58
PCS60	YBR222C	RAD52	P06778	471 aa	Known RBP	5.18	□□□□□ -1.58
PCS60	YBR222C	TOA2	P32774	122 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	YKL187C	P34231	750 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	YBR241C	P38142	488 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	GAA1	P39012	614 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	RPL13B	P40212	199 aa	Known RBP	5.18	□□□□□ -1.58
PCS60	YBR222C	POP1	P41812	875 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	OST2	P46964	130 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	SBH1	P52870	82 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	SRT1	Q03175	343 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	SDC1	Q03323	175 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	FCY1	Q12178	158 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	AI5_ALPHA	Q9ZZX1	630 aa		5.18	□□□□□ -1.58
PCS60	YBR222C	YLR422W	Q06409	1932 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	RPL2A	P0CX45	254 aa	Known RBP	5.17	□□□□□ -1.58
PCS60	YBR222C	RPL2B	P0CX46	254 aa	Known RBP	5.17	□□□□□ -1.58
PCS60	YBR222C	DAT1	P13483	248 aa	Known RBP	5.17	□□□□□ -1.58
PCS60	YBR222C	UBC5	P15732	148 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	ANB1	P19211	157 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	MTC7	P32633	139 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	PDC2	P32896	925 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	TRR2	P38816	342 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	FAA2	P39518	744 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	SPC25	P40014	221 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	MCM22	P47167	239 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	PDR17	P53844	350 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	IRC15	Q02733	499 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	HRI1	Q05905	244 aa	Known RBP	5.17	□□□□□ -1.58
PCS60	YBR222C	GPI11	Q06636	219 aa		5.17	□□□□□ -1.58
PCS60	YBR222C	FMP49	A0A023PZB3	126 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	YLR415C	O13578	112 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	YCR007C	P25354	239 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	MSN2	P33748	704 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	YBR144C	P34215	104 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	LSM2	P38203	95 aa	Known RBP	5.16	□□□□□ -1.58
PCS60	YBR222C	IPT1	P38954	527 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	PRE5	P40302	234 aa	Known RBP	5.16	□□□□□ -1.58
PCS60	YBR222C	PAN6	P40459	309 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	MOB2	P43563	287 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	MNN5	P46982	586 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	TIS11	P47977	285 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	GCV1	P48015	400 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	YGR219W	P53307	113 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	CPD1	P53314	239 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	CPR8	P53728	308 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	APJ1	P53940	528 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	RCR2	Q03446	210 aa	Known RBP	5.16	□□□□□ -1.58
PCS60	YBR222C	THI74	Q04083	370 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	YLR346C	Q06139	101 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	THI20	Q08224	551 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	ORT1	Q12375	292 aa		5.16	□□□□□ -1.58
PCS60	YBR222C	ILV1	P00927	576 aa	Known RBP	5.15	□□□□□ -1.58
PCS60	YBR222C	MRS1	P07266	363 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	MXR2	P25566	168 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.58	not detected
PCS60	YBR222C	INM1	P38710	295 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	MIT1	P40002	666 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	YER079W	P40052	210 aa	Known RBP	5.15	□□□□□ -1.58
PCS60	YBR222C	YER188W	P40103	239 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	SMX2	P40204	77 aa	Known RBP	5.15	□□□□□ -1.58
PCS60	YBR222C	BUD13	P46947	266 aa	Predicted RBP	5.15	□□□□□ -1.58
PCS60	YBR222C	YGR015C	P53208	328 aa		5.15	□□□□□ -1.58
PCS60	YBR222C	YGR039W	P53225	103 aa		5.15	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms