RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C TDA1Q03533 586 aa5.48□□□□□ -1.53
LDB7YBL006C MDM36Q06820 579 aa5.48□□□□□ -1.53
LDB7YBL006C INP53Q12271 1107 aa5.48□□□□□ -1.53
LDB7YBL006C FUS3P16892 353 aaKnown RBP5.47□□□□□ -1.53
LDB7YBL006C MRP20P32387 263 aa5.47□□□□□ -1.53
LDB7YBL006C FMP23P38231 175 aa5.47□□□□□ -1.53
LDB7YBL006C IKI1P38874 309 aa5.47□□□□□ -1.53
LDB7YBL006C SSO2P39926 295 aa5.47□□□□□ -1.53
LDB7YBL006C NOP16P40007 231 aaKnown RBP5.47□□□□□ -1.53
LDB7YBL006C RTT105P40063 208 aa5.47□□□□□ -1.53
LDB7YBL006C YGR042WP53227 271 aa5.47□□□□□ -1.53
LDB7YBL006C TMA20P89886 181 aaPredicted RBP5.47□□□□□ -1.53
LDB7YBL006C DPB4Q04603 196 aaKnown RBP5.47□□□□□ -1.53
LDB7YBL006C SWT1Q12104 458 aa5.47□□□□□ -1.53
LDB7YBL006C JID1Q12350 301 aa5.47□□□□□ -1.53
LDB7YBL006C MRPL23Q12487 163 aaPredicted RBP5.47□□□□□ -1.53
LDB7YBL006C ELO2P25358 347 aa5.46□□□□□ -1.54
LDB7YBL006C LSB5P25369 354 aa5.46□□□□□ -1.54
LDB7YBL006C RPD3P32561 433 aa5.46□□□□□ -1.54
LDB7YBL006C RAD23P32628 398 aaKnown RBP5.46□□□□□ -1.54
LDB7YBL006C GPX2P38143 162 aa5.46□□□□□ -1.54
LDB7YBL006C YBR197CP38306 217 aa5.46□□□□□ -1.54
LDB7YBL006C HTD2P38790 280 aaKnown RBP5.46□□□□□ -1.54
LDB7YBL006C BMT5P40493 336 aa5.46□□□□□ -1.54
LDB7YBL006C YJR011CP47086 261 aaPredicted RBP5.46□□□□□ -1.54
LDB7YBL006C VPS55P47111 140 aa5.46□□□□□ -1.54
LDB7YBL006C SLX9P53251 210 aaPredicted RBP5.46□□□□□ -1.54
LDB7YBL006C YDR179W-AQ03983 463 aa5.46□□□□□ -1.54
LDB7YBL006C ASM4Q05166 528 aa5.46□□□□□ -1.54
LDB7YBL006C KEI1Q06346 221 aa5.46□□□□□ -1.54
LDB7YBL006C YDL086WQ07505 273 aa5.46□□□□□ -1.54
LDB7YBL006C YOR292CQ08743 309 aa5.46□□□□□ -1.54
LDB7YBL006C YLR365WQ7LIF2 110 aa5.46□□□□□ -1.54
LDB7YBL006C RNA14P25298 677 aaKnown RBP5.45□□□□□ -1.54
LDB7YBL006C MSS1P32559 526 aaPredicted RBP5.45□□□□□ -1.54
LDB7YBL006C RIB7P33312 244 aa5.45□□□□□ -1.54
LDB7YBL006C GLY1P37303 387 aaKnown RBP5.45□□□□□ -1.54
LDB7YBL006C PRS4P38063 326 aaPredicted RBP5.45□□□□□ -1.54
LDB7YBL006C PHM8P40025 321 aa5.45□□□□□ -1.54
LDB7YBL006C PCL7P40186 285 aa5.45□□□□□ -1.54
LDB7YBL006C RBL2P48606 106 aaKnown RBP5.45□□□□□ -1.54
LDB7YBL006C CPR8P53728 308 aa5.45□□□□□ -1.54
LDB7YBL006C CWC25P53854 179 aaKnown RBP5.45□□□□□ -1.54
LDB7YBL006C MRPL22P53881 309 aa5.45□□□□□ -1.54
LDB7YBL006C LPP1Q04396 274 aa5.45□□□□□ -1.54
LDB7YBL006C HOR7Q05827 59 aa5.45□□□□□ -1.54
LDB7YBL006C MCH1Q07376 486 aa5.45□□□□□ -1.54
LDB7YBL006C MET32Q12041 191 aa5.45□□□□□ -1.54
LDB7YBL006C YPR108W-AQ3E7B3 70 aa5.45□□□□□ -1.54
LDB7YBL006C YOS1Q3E834 85 aa5.45□□□□□ -1.54
LDB7YBL006C SUS1Q6WNK7 96 aa5.45□□□□□ -1.54
LDB7YBL006C GAL1P04385 528 aa5.44□□□□□ -1.54
LDB7YBL006C PET54P10834 293 aa5.44□□□□□ -1.54
LDB7YBL006C RPL3P14126 387 aaKnown RBP5.44□□□□□ -1.54
LDB7YBL006C SEN2P16658 377 aa5.44□□□□□ -1.54
LDB7YBL006C HOM6P31116 359 aaKnown RBP5.44□□□□□ -1.54
LDB7YBL006C YUH1P35127 236 aa5.44□□□□□ -1.54
LDB7YBL006C YHK8P38776 514 aa5.44□□□□□ -1.54
LDB7YBL006C FCY21P40039 528 aa5.44□□□□□ -1.54
LDB7YBL006C RPL9BP51401 191 aaKnown RBP5.44□□□□□ -1.54
LDB7YBL006C MRPL13Q02204 264 aa5.44□□□□□ -1.54
LDB7YBL006C YML122CQ03207 126 aa5.44□□□□□ -1.54
LDB7YBL006C TSA2Q04120 196 aa5.44□□□□□ -1.54
LDB7YBL006C AEP3Q12089 606 aa5.44□□□□□ -1.54
LDB7YBL006C YLR122CQ12312 125 aa5.44□□□□□ -1.54
LDB7YBL006C YHR212W-AP0CX91 67 aa5.43□□□□□ -1.54
LDB7YBL006C OLE1P21147 510 aaKnown RBP5.43□□□□□ -1.54
LDB7YBL006C ROX3P25046 220 aa5.43□□□□□ -1.54
LDB7YBL006C FMT1P32785 401 aa5.43□□□□□ -1.54
LDB7YBL006C FLO10P36170 1169 aa5.43□□□□□ -1.54
LDB7YBL006C MED8P38304 223 aa5.43□□□□□ -1.54
LDB7YBL006C GPP2P40106 250 aaKnown RBP5.43□□□□□ -1.54
LDB7YBL006C ERV29P53337 310 aa5.43□□□□□ -1.54
LDB7YBL006C BOL1Q3E793 110 aa5.43□□□□□ -1.54
LDB7YBL006C RPL9AP05738 191 aaKnown RBP5.42□□□□□ -1.54
LDB7YBL006C CDC34P14682 295 aa5.42□□□□□ -1.54
LDB7YBL006C YKR045CP36138 183 aa5.42□□□□□ -1.54
LDB7YBL006C YJL213WP40896 331 aa5.42□□□□□ -1.54
LDB7YBL006C CAT5P41735 233 aa5.42□□□□□ -1.54
LDB7YBL006C ALG9P53868 555 aaKnown RBP5.42□□□□□ -1.54
LDB7YBL006C MGR3Q04472 501 aa5.42□□□□□ -1.54
LDB7YBL006C PEX27Q08580 376 aa5.42□□□□□ -1.54
LDB7YBL006C SOG2Q08817 791 aa5.42□□□□□ -1.54
LDB7YBL006C MED4Q12343 284 aa5.42□□□□□ -1.54
LDB7YBL006C CKA1P15790 372 aa5.41□□□□□ -1.54
LDB7YBL006C STF2P16965 84 aa5.41□□□□□ -1.54
LDB7YBL006C YMR31P19955 123 aa5.41□□□□□ -1.54
LDB7YBL006C YKL075CP36083 450 aa5.41□□□□□ -1.54
LDB7YBL006C YJL163CP46996 555 aa5.41□□□□□ -1.54
LDB7YBL006C YLR031WQ07978 186 aa5.41□□□□□ -1.54
LDB7YBL006C YOR283WQ12040 230 aaKnown RBP5.41□□□□□ -1.54
LDB7YBL006C MSH5Q12175 901 aa5.41□□□□□ -1.54
LDB7YBL006C UBA3Q99344 299 aa5.41□□□□□ -1.54
LDB7YBL006C CDC23P16522 626 aa5.4□□□□□ -1.54
LDB7YBL006C YBR144CP34215 104 aa5.4□□□□□ -1.54
LDB7YBL006C MRPL27P36526 146 aaPredicted RBP5.4□□□□□ -1.54
LDB7YBL006C MBA1P38300 278 aa5.4□□□□□ -1.54
LDB7YBL006C POP2P39008 433 aa5.4□□□□□ -1.54
LDB7YBL006C JLP2P40206 208 aa5.4□□□□□ -1.54
LDB7YBL006C SPO19Q03029 223 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms