RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W RMD6P39975 231 aa1.52□□□□□ -2.17
SNC1YAL030W HMF1P40037 129 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W YER084WP40057 128 aa1.52□□□□□ -2.17
SNC1YAL030W POG1P40473 351 aa1.52□□□□□ -2.17
SNC1YAL030W MRPL49P40858 161 aaPredicted RBP1.52□□□□□ -2.17
SNC1YAL030W SMD3P43321 101 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W RPL9BP51401 191 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W RPL26BP53221 127 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W CAB4P53332 305 aa1.52□□□□□ -2.17
SNC1YAL030W SSU72P53538 206 aaPredicted RBP1.52□□□□□ -2.17
SNC1YAL030W APJ1P53940 528 aa1.52□□□□□ -2.17
SNC1YAL030W COG5P53951 403 aa1.52□□□□□ -2.17
SNC1YAL030W ATG39Q06159 398 aa1.52□□□□□ -2.17
SNC1YAL030W CDD1Q06549 142 aa1.52□□□□□ -2.17
SNC1YAL030W YPR195CQ06594 109 aa1.52□□□□□ -2.17
SNC1YAL030W USB1Q12208 290 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W PSF1Q12488 208 aa1.52□□□□□ -2.17
SNC1YAL030W IKI3Q06706 1349 aaKnown RBP1.51□□□□□ -2.17
SNC1YAL030W MRS1P07266 363 aa1.51□□□□□ -2.17
SNC1YAL030W PUT1P09368 476 aa1.51□□□□□ -2.17
SNC1YAL030W YPR170W-BP0C5R9 85 aa1.51□□□□□ -2.17
SNC1YAL030W FBA1P14540 359 aaKnown RBP1.51□□□□□ -2.17
SNC1YAL030W SCO1P23833 295 aa1.51□□□□□ -2.17
SNC1YAL030W CNB1P25296 175 aa1.51□□□□□ -2.17
SNC1YAL030W ATG22P25568 528 aa1.51□□□□□ -2.17
SNC1YAL030W SCM4P32564 187 aa1.51□□□□□ -2.17
SNC1YAL030W SEC17P32602 292 aa1.51□□□□□ -2.17
SNC1YAL030W PTM1P32857 523 aa1.51□□□□□ -2.17
SNC1YAL030W SDH4P37298 181 aa1.51□□□□□ -2.17
SNC1YAL030W CTR2P38865 189 aa1.51□□□□□ -2.17
SNC1YAL030W AST2P39945 430 aaKnown RBP1.51□□□□□ -2.17
SNC1YAL030W PIR5P46999 287 aa1.51□□□□□ -2.17
SNC1YAL030W YGL088WP53151 121 aa1.51□□□□□ -2.17
SNC1YAL030W JAC1P53193 184 aa1.51□□□□□ -2.17
SNC1YAL030W NRK1P53915 240 aa1.51□□□□□ -2.17
SNC1YAL030W FUS2Q05670 677 aa1.51□□□□□ -2.17
SNC1YAL030W SMD2Q06217 110 aaKnown RBP1.51□□□□□ -2.17
SNC1YAL030W YLR036CQ07986 203 aa1.51□□□□□ -2.17
SNC1YAL030W PRM7Q12459 698 aa1.51□□□□□ -2.17
SNC1YAL030W YDL085C-AQ3E7B7 68 aaKnown RBP1.51□□□□□ -2.17
SNC1YAL030W CDC8P00572 216 aa1.5□□□□□ -2.17
SNC1YAL030W SIR2P06700 562 aa1.5□□□□□ -2.17
SNC1YAL030W YLR156WP0CE96 114 aa1.5□□□□□ -2.17
SNC1YAL030W YLR159WP0CE97 114 aa1.5□□□□□ -2.17
SNC1YAL030W YLR161WP0CE98 114 aa1.5□□□□□ -2.17
SNC1YAL030W SNF4P12904 322 aa1.5□□□□□ -2.17
SNC1YAL030W GCY1P14065 312 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SNC1YAL030W MGT1P26188 188 aa1.5□□□□□ -2.17
SNC1YAL030W MIG1P27705 504 aa1.5□□□□□ -2.17
SNC1YAL030W TRR1P29509 319 aaKnown RBP1.5□□□□□ -2.17
SNC1YAL030W UTP30P36144 274 aaKnown RBP1.5□□□□□ -2.17
SNC1YAL030W SKG1P36169 355 aa1.5□□□□□ -2.17
SNC1YAL030W MAK5P38112 773 aaPredicted RBP1.5□□□□□ -2.17
SNC1YAL030W PDS1P40316 373 aaPredicted RBP1.5□□□□□ -2.17
SNC1YAL030W YJL144WP47009 104 aa1.5□□□□□ -2.17
SNC1YAL030W AIM25P47140 327 aa1.5□□□□□ -2.17
SNC1YAL030W UBC12P52491 188 aa1.5□□□□□ -2.17
SNC1YAL030W YNL184CP53876 108 aa1.5□□□□□ -2.17
SNC1YAL030W SWP1Q02795 286 aa1.5□□□□□ -2.17
SNC1YAL030W GAS3Q03655 524 aa1.5□□□□□ -2.17
SNC1YAL030W YDR249CQ03787 373 aa1.5□□□□□ -2.17
SNC1YAL030W ARO80Q04052 950 aa1.5□□□□□ -2.17
SNC1YAL030W TRM12Q04235 462 aa1.5□□□□□ -2.17
SNC1YAL030W NOC4Q06512 552 aaPredicted RBP1.5□□□□□ -2.17
SNC1YAL030W YPL162CQ12042 273 aa1.5□□□□□ -2.17
SNC1YAL030W TSC3Q3E790 80 aa1.5□□□□□ -2.17
SNC1YAL030W TDA8Q6B2U8 126 aa1.5□□□□□ -2.17
SNC1YAL030W MSW1P04803 379 aa1.49□□□□□ -2.17
SNC1YAL030W URA5P13298 226 aaKnown RBP1.49□□□□□ -2.17
SNC1YAL030W RPB3P16370 318 aaKnown RBP1.49□□□□□ -2.17
SNC1YAL030W MRPS28P21771 286 aa1.49□□□□□ -2.17
SNC1YAL030W BET1P22804 142 aa1.49□□□□□ -2.17
SNC1YAL030W CLB6P32943 380 aa1.49□□□□□ -2.17
SNC1YAL030W FMP23P38231 175 aa1.49□□□□□ -2.17
SNC1YAL030W FES1P38260 290 aa1.49□□□□□ -2.17
SNC1YAL030W GLE2P40066 365 aa1.49□□□□□ -2.17
SNC1YAL030W FMP32P43557 207 aa1.49□□□□□ -2.17
SNC1YAL030W SKI6P46948 246 aaPredicted RBP1.49□□□□□ -2.17
SNC1YAL030W SNX4P47057 423 aa1.49□□□□□ -2.17
SNC1YAL030W YIP3P53633 176 aa1.49□□□□□ -2.17
SNC1YAL030W YNL247WP53852 767 aaKnown RBP1.49□□□□□ -2.17
SNC1YAL030W YLR460CP54007 376 aa1.49□□□□□ -2.17
SNC1YAL030W SNO1Q03144 224 aa1.49□□□□□ -2.17
SNC1YAL030W ARR2Q06597 130 aa1.49□□□□□ -2.17
SNC1YAL030W YOL024WQ08172 172 aa1.49□□□□□ -2.17
SNC1YAL030W MCP1Q12106 302 aa1.49□□□□□ -2.17
SNC1YAL030W YHR214C-EQ8TGK0 99 aa1.49□□□□□ -2.17
SNC1YAL030W IGO2Q9P305 131 aa1.49□□□□□ -2.17
SNC1YAL030W YPR096CO13587 100 aa1.48□□□□□ -2.17
SNC1YAL030W MBF1O14467 151 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W YHR032W-AP0C5N6 59 aa1.48□□□□□ -2.17
SNC1YAL030W PET9P18239 318 aaKnown RBP1.48□□□□□ -2.17
SNC1YAL030W TAH1P25638 111 aaPredicted RBP1.48□□□□□ -2.17
SNC1YAL030W MEI4P29467 408 aa1.48□□□□□ -2.17
SNC1YAL030W OCH1P31755 480 aa1.48□□□□□ -2.17
SNC1YAL030W CLG1P35190 452 aa1.48□□□□□ -2.17
SNC1YAL030W SRP14P38985 146 aa1.48□□□□□ -2.17
SNC1YAL030W PRM10P42946 383 aa1.48□□□□□ -2.17
SNC1YAL030W MNN5P46982 586 aa1.48□□□□□ -2.17
SNC1YAL030W AIF1P52923 378 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms