RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CYP26C1Q6V0L0 522 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 TMEM130Q8N3G9 435 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 DOCK8Q8NF50 2099 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 ASB7Q9H672 318 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 USP25Q9UHP3 1055 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 SERTAD1Q9UHV2 236 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 FBXW11Q9UKB1 542 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-231ENST00000641939 EIF3DO15371 548 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHGDH-231ENST00000641939 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
PHGDH-231ENST00000641939 RFPL2O75678 378 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 PAPLNO95428 1278 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
PHGDH-231ENST00000641939 NFICP08651 508 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 CASP1P29466 404 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 GUCY2FP51841 1108 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 CUL4BQ13620 913 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 RAB33AQ14088 237 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 ZDHHC7Q9NXF8 308 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 MUTYHQ9UIF7 546 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 HPSEQ9Y251 543 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 C2CD2Q9Y426 696 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
PHGDH-231ENST00000641939 PVALEFA0A1B0GWK0 134 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 H7C4K7 107 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 ZMYND10O75800 440 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 IL18RAPO95256 599 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 NUCB2P80303 420 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 EHHADHQ08426 723 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 MRPL58Q14197 206 aaKnown RBP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 RSPO2Q6UXX9 243 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 CCDC149Q6ZUS6 474 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 EPM2AIP1Q7L775 607 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 NT5DC4Q86YG4 428 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 GRAMD1CQ8IYS0 662 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 ZSWIM2Q8NEG5 633 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 ZNF507Q8TCN5 953 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 SMG7Q92540 1137 aaKnown RBP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 ZNF707Q96C28 371 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-231ENST00000641939 PAGE5Q96GU1 130 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 PCDHB8Q9UN66 801 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 TECTAO75443 2155 aa16.3■□□□□ 0.2
PHGDH-231ENST00000641939 UBE4BO95155 1302 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 FAM237AA0A1B0GTK4 181 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 C2CD4DB7Z1M9 353 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 M0QZQ0 153 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
PHGDH-231ENST00000641939 EXTL3O43909 919 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 HOXD13P35453 343 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 SYKP43405 635 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 C9orf57Q5W0N0 161 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 SLC8B1Q6J4K2 584 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 PRKD2Q9BZL6 878 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 PCIF1Q9H4Z3 704 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 TSC2P49815 1807 aa16.29■□□□□ 0.2
PHGDH-231ENST00000641939 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 ANO9A1A5B4 782 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 PIRO00625 290 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 PPEF2O14830 753 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 GPR37L1O60883 481 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 C8AP07357 584 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 HNRNPA1P09651 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
PHGDH-231ENST00000641939 PAX3P23760 479 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 NDUFA8P51970 172 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 LILRA4P59901 499 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 ROR1Q01973 937 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 CTXN3Q4LDR2 81 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 PPM1LQ5SGD2 360 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 BRSK2Q8IWQ3 736 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 EFCAB13Q8IY85 973 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 TDRD5Q8NAT2 981 aaKnown RBP16.28■□□□□ 0.2
PHGDH-231ENST00000641939 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
PHGDH-231ENST00000641939 ACSF2Q96CM8 615 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-231ENST00000641939 GDPD2Q9HCC8 539 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
PHGDH-231ENST00000641939 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
PHGDH-231ENST00000641939 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms