RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 SNX27Q96L92 541 aa19.56■□□□□ 0.72
PHGDH-209ENST00000641074 GLT1D1Q96MS3 346 aa19.56■□□□□ 0.72
PHGDH-209ENST00000641074 INTUQ9ULD6 942 aa19.56■□□□□ 0.72
PHGDH-209ENST00000641074 CNTN6Q9UQ52 1028 aa19.56■□□□□ 0.72
PHGDH-209ENST00000641074 PCDHB4Q9Y5E5 795 aa19.56■□□□□ 0.72
PHGDH-209ENST00000641074 BTNL10A8MVZ5 291 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 TACC1O75410 805 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 RPS6KA5O75582 802 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 YARSP54577 528 aaKnown RBP19.55■□□□□ 0.72
PHGDH-209ENST00000641074 GALCP54803 685 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 PTPN11Q06124 597 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-209ENST00000641074 TMEM270Q6UE05 265 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 UBR7Q8N806 425 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 TRIM58Q8NG06 486 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 TAF4BQ92750 862 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 ZMAT2Q96NC0 199 aaKnown RBP19.55■□□□□ 0.72
PHGDH-209ENST00000641074 NOX5Q96PH1 765 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 ST3GAL5Q9UNP4 418 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 FAM170AA1A519 330 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 RECQL4O94761 1208 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 AKAP5P24588 427 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 ASPAP45381 313 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 NAP1L1P55209 391 aaKnown RBP19.55■□□□□ 0.72
PHGDH-209ENST00000641074 ALKAL1Q6UXT8 129 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 BEGAINQ9BUH8 593 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 APOL6Q9BWW8 343 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 DPP3Q9NY33 737 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 DERAQ9Y315 318 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 PCDHB2Q9Y5E7 798 aa19.55■□□□□ 0.72
PHGDH-209ENST00000641074 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 ENC1O14682 589 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 UQCRHP07919 91 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 POLR2BP30876 1174 aaKnown RBP19.54■□□□□ 0.72
PHGDH-209ENST00000641074 BPIFB4P59827 614 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 PTK7Q13308 1070 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 TWF2Q6IBS0 349 aaKnown RBP19.54■□□□□ 0.72
PHGDH-209ENST00000641074 RBBP8NLQ8NC74 664 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-209ENST00000641074 OSBPL7Q9BZF2 842 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.54■□□□□ 0.725e-8■■□□□ 14.4
PHGDH-209ENST00000641074 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 NXF1Q9UBU9 619 aaKnown RBP19.54■□□□□ 0.72
PHGDH-209ENST00000641074 ITGA11Q9UKX5 1188 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 POLIQ9UNA4 740 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 NOD1Q9Y239 953 aa19.54■□□□□ 0.72
PHGDH-209ENST00000641074 RALGAPA2Q2PPJ7 1873 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 TRIP11Q15643 1979 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 FRMPD3Q5JV73 1810 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 A0A1W2PQ45 241 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-209ENST00000641074 A0A1W2PQY0 241 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 ATP1A1P05023 1023 aaKnown RBP19.53■□□□□ 0.72
PHGDH-209ENST00000641074 WEE2P0C1S8 567 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 NFX1Q12986 1120 aaKnown RBP19.53■□□□□ 0.72
PHGDH-209ENST00000641074 ZBTB6Q15916 424 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 SCARA5Q6ZMJ2 495 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 ARRDC4Q8NCT1 418 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 SMG8Q8ND04 991 aaKnown RBP19.53■□□□□ 0.72
PHGDH-209ENST00000641074 ALS2CR12Q96Q35 445 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 ISCUQ9H1K1 167 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 CISHQ9NSE2 258 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 CNTN3Q9P232 1028 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 AGAP1Q9UPQ3 857 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 IPPQ9Y573 584 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 MRFAP1Q9Y605 127 aa19.53■□□□□ 0.72
PHGDH-209ENST00000641074 FTLP02792 175 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-209ENST00000641074 TMEM253P0C7T8 217 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 GZMAP12544 262 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 CD58P19256 250 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 ATICP31939 592 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 ZNF132P52740 706 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 TRIM71Q2Q1W2 868 aaKnown RBP19.52■□□□□ 0.72
PHGDH-209ENST00000641074 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 ZNF667Q5HYK9 610 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 VRTNQ9H8Y1 702 aa19.52■□□□□ 0.72
PHGDH-209ENST00000641074 AGO3Q9H9G7 860 aaKnown RBP19.52■□□□□ 0.72
PHGDH-209ENST00000641074 RTN2O75298 545 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 ABCB4P21439 1286 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 GTF2F1P35269 517 aaKnown RBP eCLIP19.52■□□□□ 0.71
PHGDH-209ENST00000641074 RBP5P82980 135 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 AMPD2Q01433 879 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 ZNF677Q86XU0 584 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 HPDLQ96IR7 371 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 THAP2Q9H0W7 228 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 UNC93B1Q9H1C4 597 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 RNF19AQ9NV58 838 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 KLK14Q9P0G3 267 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 PARP2Q9UGN5 583 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 JRKLQ9Y4A0 524 aa19.52■□□□□ 0.71
PHGDH-209ENST00000641074 A0A0A6YYK5 440 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-209ENST00000641074 ANO9A1A5B4 782 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 ANKRD62A6NC57 917 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 SLU7O95391 586 aaKnown RBP19.51■□□□□ 0.71
PHGDH-209ENST00000641074 GNA15P30679 374 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 FBXO47Q5MNV8 452 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 SLC43A3Q8NBI5 491 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 CTNNBL1Q8WYA6 563 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-209ENST00000641074 C18orf25Q96B23 403 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-209ENST00000641074 FAXDC2Q96IV6 333 aa19.51■□□□□ 0.71
PHGDH-209ENST00000641074 BCO2Q9BYV7 579 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms