RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SMNDC1O75940 238 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 WFS1O76024 890 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 PROSCO94903 275 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 NPR1P16066 1061 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 KLRC2P26717 231 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 SSTR3P32745 418 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ABL2P42684 1182 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 YARSP54577 528 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 MOGSQ13724 837 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 FASTKD3Q14CZ7 662 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 TAF11Q15544 211 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 BBOF1Q8ND07 529 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 TMEM161BQ8NDZ6 487 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 DENND1AQ8TEH3 1009 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 MRRFQ96E11 262 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 AGBL1Q96MI9 1066 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 LRMDAQ9H2I8 198 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 KIAA1586Q9HCI6 787 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ECE2O60344 883 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 CFHP08603 1231 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ZSCAN5DPP0CG00 497 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 SSR1P43307 286 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 SNRPFP62306 86 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 PCNX4Q63HM2 1172 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 LMBRD2Q68DH5 695 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ZNF449Q6P9G9 518 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 MAP4K3Q8IVH8 894 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 RIBC1Q8N443 379 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 POMGNT1Q8WZA1 660 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 PRMT6Q96LA8 375 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 LRRC37BQ96QE4 947 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 IWS1Q96ST2 819 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 C11orf70Q9BRQ4 267 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 ZMYND8Q9ULU4 1186 aaPredicted RBP11.58□□□□□ -0.56
SNIP1-204ENST00000638725 USH1CQ9Y6N9 552 aa11.58□□□□□ -0.56
SNIP1-204ENST00000638725 DENND3A2RUS2 1198 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 MAGEB2O15479 319 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 PEX11AO75192 247 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 ENTPD3O75355 529 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 ABHD2P08910 425 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 GM2AP17900 193 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 NSFP46459 744 aaKnown RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 NPTX2P47972 431 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 CCNHP51946 323 aaPredicted RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 CCNG1P51959 295 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 SOX10P56693 466 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 CYP24A1Q07973 514 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 PARP6Q2NL67 630 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 XKR9Q5GH70 373 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 RHOT1Q8IXI2 618 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 FAM13CQ8NE31 585 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 FAM81BQ96LP2 452 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 MOV10L1Q9BXT6 1211 aaKnown RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 AGO4Q9HCK5 861 aaKnown RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 THSD7AQ9UPZ6 1657 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 TCP10L2B9ZVM9 353 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 NFIBO00712 420 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 CBX6O95503 412 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 ETS1P14921 441 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 KRT15P19012 456 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 RPA3P35244 121 aaPredicted RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 MCCD1P59942 119 aaPredicted RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 GCNT1Q02742 428 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 SPARCL1Q14515 664 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 SLC1A5Q15758 541 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 TKFCQ3LXA3 575 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 KAZNQ674X7 775 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 MON1BQ7L1V2 547 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 MFSD14AQ96MC6 490 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 TMX4Q9H1E5 349 aaPredicted RBP11.57□□□□□ -0.56
SNIP1-204ENST00000638725 RNPEPL1Q9HAU8 725 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 USP21Q9UK80 565 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 SYNPO2Q9UMS6 1093 aa11.57□□□□□ -0.56
SNIP1-204ENST00000638725 PSTPIP1O43586 416 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
SNIP1-204ENST00000638725 T-ENOLP0DO92 83 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 MYBL1P10243 752 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 KRT10P13645 584 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 GNAZP19086 355 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 EPHB2P29323 1055 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 DSG3P32926 999 aa11.56□□□□□ -0.56
SNIP1-204ENST00000638725 GCKP35557 465 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms