RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 MTM1Q13496 603 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 CHAMP1Q96JM3 812 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 KLHL31Q9H511 634 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PCNAP12004 261 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PIF1Q9H611 641 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PALMO75781 387 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 HOMEZQ8IX15 550 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PARD6BQ9BYG5 372 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 TMEM60Q9H2L4 133 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 SNX24Q9Y343 169 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 TRIM13O60858 407 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PSMA3P25788 255 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 CLK1P49759 484 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 ARMCX6Q7L4S7 300 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 TADA1Q96BN2 335 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 FAM136AQ96C01 138 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 KIFC1Q9BW19 673 aa17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 COPS7BQ9H9Q2 264 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-258ENST00000638029 PODXLO00592 558 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PRKAB2O43741 272 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SESN2P58004 480 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 COQ6Q9Y2Z9 468 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 HARS2P49590 506 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PSMC6P62333 389 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 AMHR2Q16671 573 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CNBD2Q96M20 576 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CARD9Q9H257 536 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SNX8Q9Y5X2 465 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 KDM5CP41229 1560 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CHUKO15111 745 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 TYK2P29597 1187 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SYTL1Q8IYJ3 562 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 ZBED8Q8IZ13 594 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 TLR7Q9NYK1 1049 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CDK17Q00537 523 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 CASP8Q14790 479 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 LRRC14BA6NHZ5 514 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 GRAP2O75791 330 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PYGMP11217 842 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 PKP1Q13835 747 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 C10orf120Q5SQS8 335 aa17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-258ENST00000638029 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CLCN6P51797 869 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 DNAJC1Q96KC8 554 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 ZFYVE16Q7Z3T8 1539 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 ZNF500O60304 480 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 RNASEH1O60930 286 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 PDIA2Q13087 525 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 PLEKHA5Q9HAU0 1116 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 MYH11P35749 1972 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 SYNGAP1Q96PV0 1343 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 NCF1BA6NI72 391 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 NCF1CA8MVU1 366 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CYP27B1O15528 508 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 ERN1O75460 977 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 NCF1P14598 390 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 GPC1P35052 558 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 HSD17B4P51659 736 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 RUNX1T1Q06455 604 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CDH18Q13634 790 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 LPIN1Q14693 890 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 SHCBP1Q8NEM2 672 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 DYNC1LI2O43237 492 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 AVPR1AP37288 418 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 RCN1Q15293 331 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
CACNA1A-258ENST00000638029 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms