RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	PRC1	O43663	620 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	EGF	P01133	1207 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ATF2	P15336	505 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ARF4	P18085	180 aa	Predicted RBP	10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	CIITA	P33076	1130 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	EPHA5	P54756	1037 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	TWF1	Q12792	350 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	USP39	Q53GS9	565 aa	Known RBP	10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	STXBP5	Q5T5C0	1151 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	SLC8B1	Q6J4K2	584 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	SLC27A1	Q6PCB7	646 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	FERMT3	Q86UX7	667 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	MICU3	Q86XE3	530 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	PNPLA1	Q8N8W4	532 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	LEMD2	Q8NC56	503 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	RDM1	Q8NG50	284 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ADAMTS14	Q8WXS8	1223 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	SLC5A5	Q92911	643 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	TPSD1	Q9BZJ3	242 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	RCAN3	Q9UKA8	241 aa		10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337		V9GY48	417 aa	Predicted RBP	10.85	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ADAMTS9	Q9P2N4	1935 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	GON4L	Q3T8J9	2241 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337		A0A087WV48	116 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337		A0A1W2PRU2	124 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	hCG_1984214	I3L0E3	225 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	B4GALT5	O43286	388 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	B3GAT3	O94766	335 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	TH	P07101	528 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	FTH1P19	P0C7X4	201 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ATXN3	P54252	364 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	PTEN	P60484	403 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	CACNB1	Q02641	598 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	PTH1R	Q03431	593 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	DMC1	Q14565	340 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	NAB2	Q15742	525 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	AMHR2	Q16671	573 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ARMCX6	Q7L4S7	300 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	SYT13	Q7L8C5	426 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	TMTC2	Q8N394	836 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	ZNF713	Q8N859	430 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	RPLP0P6	Q8NHW5	317 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	EXOC6	Q8TAG9	804 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	CEP170P1	Q96L14	293 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	GTPBP2	Q9BX10	602 aa	Known RBP	10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	LNPK	Q9C0E8	428 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	CXCL16	Q9H2A7	254 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	CLMP	Q9H6B4	373 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	DHX33	Q9H6R0	707 aa	Known RBP	10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	FSCN3	Q9NQT6	498 aa		10.84	□□□□□ -0.67
SPTAN1-231	ENST00000636337	TRDMT1	O14717	391 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	ASAP2	O43150	1006 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	OPHN1	O60890	802 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PSMD10	O75832	226 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CFI	P05156	583 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	RFC5	P40937	340 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	ABCG1	P45844	678 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PSMC5	P62195	406 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PLCB2	Q00722	1185 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	MBTD1	Q05BQ5	628 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	HNRNPD	Q14103	355 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	EMC2	Q15006	297 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PTPA	Q15257	358 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TRIP6	Q15654	476 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	MAPK6	Q16659	721 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	REXO1	Q8N1G1	1221 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TSTD1	Q8NFU3	115 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PIP4K2C	Q8TBX8	421 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TCP11	Q8WWU5	503 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CCDC136	Q96JN2	1154 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CAMK1G	Q96NX5	476 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TMEM74B	Q9NUR3	256 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	DKK4	Q9UBT3	224 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PTPN13	Q12923	2485 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PTPRB	P23467	1997 aa		10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	ATXN2	Q99700	1313 aa	Known RBP	10.83	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TMEM189-UBE2V1	I3L0A0	370 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CD59	P13987	128 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	BRCC3	P46736	316 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CYP4F3	Q08477	520 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	SLC23A3	Q6PIS1	610 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	SYT12	Q8IV01	421 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	SCUBE3	Q8IX30	993 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	EXOC8	Q8IYI6	725 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	BPIFB1	Q8TDL5	484 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	ACD	Q96AP0	544 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	CHFR	Q96EP1	664 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	TMEM87B	Q96K49	555 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	DCBLD2	Q96PD2	775 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	MTA3	Q9BTC8	594 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PCDHB9	Q9Y5E1	797 aa		10.82	□□□□□ -0.68
SPTAN1-231	ENST00000636337	ARID2	Q68CP9	1835 aa		10.81	□□□□□ -0.68
SPTAN1-231	ENST00000636337	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.81	□□□□□ -0.68
SPTAN1-231	ENST00000636337		A0A1B0GUA9	196 aa		10.81	□□□□□ -0.68
SPTAN1-231	ENST00000636337	PYCARD-AS1	I3L0S3	204 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms