RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MYL6P60660 151 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 NOMO3P69849 1222 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 SLC7A5Q01650 507 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MKRN3Q13064 507 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 PPFIA1Q13136 1202 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 TRPC3Q13507 836 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 CUL1Q13616 776 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MESDQ14696 234 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 GRIK4Q16099 956 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ZNF568Q3ZCX4 644 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 LIN9Q5TKA1 542 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 DCAF12L1Q5VU92 463 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 OLFML2BQ68BL8 750 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 SPOPLQ6IQ16 392 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 PLEKHA7Q6IQ23 1121 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 TMEM270Q6UE05 265 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 C17orf99Q6UX52 265 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 THNSL1Q8IYQ7 743 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MREGQ8N565 214 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 RBBP8NLQ8NC74 664 aaPredicted RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 CXorf38Q8TB03 319 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ZNF606Q8WXB4 792 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ZNF653Q96CK0 615 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 CYFIP2Q96F07 1278 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 NLRP4Q96MN2 994 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 RUNDC3BQ96NL0 473 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ARID3AQ99856 593 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 ZSWIM1Q9BR11 485 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 FDXACB1Q9BRP7 624 aaPredicted RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 NIF3L1Q9GZT8 377 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 XYLT2Q9H1B5 865 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 PDZD7Q9H5P4 517 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 PLEKHA5Q9HAU0 1116 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 CYP3A43Q9HB55 503 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 EPB41L5Q9HCM4 733 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 MRPL47Q9HD33 250 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 MED4Q9NPJ6 270 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.94□□□□□ -1.46
NEK3-211ENST00000629912 GJD2Q9UKL4 321 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 HPCAL4Q9UM19 191 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 PCDHGC3Q9UN70 934 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 GNEQ9Y223 722 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 DERAQ9Y315 318 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 NOC2LQ9Y3T9 749 aaKnown RBP5.94□□□□□ -1.46
NEK3-211ENST00000629912 CITO14578 2027 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 NRCAMQ92823 1304 aa5.94□□□□□ -1.46
NEK3-211ENST00000629912 SMIM35A0A1B0GVV1 85 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MBLAC1A4D2B0 266 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 MYO1FO00160 1098 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 HAS3O00219 553 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 FSCN2O14926 492 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 DYNC1LI2O43237 492 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 THAP12O43422 761 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 TSPAN1O60635 241 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PROSCO94903 275 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 FGGP02679 453 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PAEPP09466 180 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 TMEM191BP0C7N4 346 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ZNF865P0CJ78 1059 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 PYGMP11217 842 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 HARSP12081 509 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 ITGA4P13612 1032 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ARF4P18085 180 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 MMP8P22894 467 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 EIF4BP23588 611 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 GNA15P30679 374 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CHRNA3P32297 505 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 MAN1A1P33908 653 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 GRM5P41594 1212 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 NSFP46459 744 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 CARSP49589 748 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 DNA2P51530 1060 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 HUNKP57058 714 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 RWDD2BP57060 319 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 IGBP1P78318 339 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 ADAM17P78536 824 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 TFAMQ00059 246 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 GUCY2DQ02846 1103 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 PAK2Q13177 524 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 DHX34Q14147 1143 aaKnown RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 TERF2Q15554 542 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CYP1B1Q16678 543 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 SLC10A6Q3KNW5 377 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 GLIPR1L2Q4G1C9 344 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 NAA35Q5VZE5 725 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 SCARA3Q6AZY7 606 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 CHADLQ6NUI6 762 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
NEK3-211ENST00000629912 MON1BQ7L1V2 547 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 APBB1IPQ7Z5R6 666 aaPredicted RBP5.93□□□□□ -1.46
NEK3-211ENST00000629912 RASAL3Q86YV0 1011 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 KLHL7Q8IXQ5 586 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 IQCKQ8N0W5 287 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 NME8Q8N427 588 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 TTC39CQ8N584 583 aa5.93□□□□□ -1.46
NEK3-211ENST00000629912 FEZF2Q8TBJ5 459 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms