RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 UBXN11Q5T124 520 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 TWF2Q6IBS0 349 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF571Q7Z3V5 609 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 BEST2Q8NFU1 509 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 CAGE1Q8TC20 777 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 TATDN2Q93075 761 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 WNT8BQ93098 351 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 KREMEN1Q96MU8 473 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 DEFB118Q96PH6 123 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 NIF3L1Q9GZT8 377 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ERVK-5Q9HDB9 667 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 SNTG2Q9NY99 539 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 CNTN3Q9P232 1028 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 MYO1AQ9UBC5 1043 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 OGDHLQ9ULD0 1010 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 REXO2Q9Y3B8 237 aaKnown RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 PCDHA13Q9Y5I0 950 aa8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1-206ENST00000627002 A0A087X0T9 212 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF263O14978 683 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 RECQL4O94761 1208 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 STAU1O95793 577 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CST3P01034 146 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 KRT19P08727 400 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM228BP0C875 321 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 PNMA6AP0CW24 399 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 GHRP10912 638 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CKBP12277 381 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 SKIP12755 728 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 KRT5P13647 590 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 KCNE1P15382 129 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 TNFAIP3P21580 790 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CDK7P50613 346 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 PDE6CP51160 858 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ETF1P62495 437 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 GFPT1Q06210 699 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 BFSP2Q13515 415 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 MTFR1Q15390 333 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 NAB2Q15742 525 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 XKR4Q5GH76 650 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF667Q5HYK9 610 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CCDC122Q5T0U0 273 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF618Q5T7W0 954 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ALKAL1Q6UXT8 129 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 ZNF677Q86XU0 584 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 GPIHBP1Q8IV16 184 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 C1orf127Q8N9H9 656 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 KIF18AQ8NI77 898 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 KAT5Q92993 513 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 AGPAT1Q99943 283 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 XYLT2Q9H1B5 865 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 TRPV6Q9H1D0 765 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 FAM124BQ9H5Z6 455 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 VRTNQ9H8Y1 702 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 APOBEC3GQ9HC16 384 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 LZTFL1Q9NQ48 299 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 DPP3Q9NY33 737 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 SIX4Q9UIU6 781 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 INTUQ9ULD6 942 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 CNTN6Q9UQ52 1028 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 IPPQ9Y573 584 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 PAXBP1Q9Y5B6 917 aa8.09□□□□□ -1.11
PTP4A1-206ENST00000627002 BTNL10A8MVZ5 291 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 DDX3XO00571 662 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 PJA2O43164 708 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CYP26A1O43174 497 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CD4P01730 458 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ITGB3P05106 788 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ITGA4P13612 1032 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CYP11B1P15538 503 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ATF7P17544 494 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CAPN2P17655 700 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CYP3A5P20815 502 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ACO1P21399 889 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CD52P31358 61 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ARHGAP25P42331 645 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 GNG11P61952 73 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CDR2Q01850 454 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 MYO1EQ12965 1108 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 LPIN1Q14693 890 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ZBTB6Q15916 424 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 SPOPLQ6IQ16 392 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 ALKBH5Q6P6C2 394 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 TTC39CQ8N584 583 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 LRRC52Q8N7C0 313 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 SMG8Q8ND04 991 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 SLC30A5Q8TAD4 765 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 CXorf38Q8TB03 319 aa8.08□□□□□ -1.12
PTP4A1-206ENST00000627002 EPS8L1Q8TE68 723 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms