RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 ATP4AP20648 1035 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 FOXN2P32314 431 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 RIPK1Q13546 671 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 SCARA5Q6ZMJ2 495 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 C1orf186Q6ZWK4 172 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 FAM13CQ8NE31 585 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 TAC1P20366 129 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 ADRA1DP25100 572 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 PHBP35232 272 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 SPOPLQ6IQ16 392 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 TMEM179Q6ZVK1 233 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 RHOT1Q8IXI2 618 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 CALN1Q9BXU9 219 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 SLC13A1Q9BZW2 595 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 NUP98P52948 1817 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 THOC5Q13769 683 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 KIF22Q14807 665 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 FASTKD3Q14CZ7 662 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 OTOP1Q7RTM1 612 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 TMEM121Q9BTD3 319 aa12.06□□□□□ -0.48
PCDHGA11-203ENST00000622044 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 A0A1W2PPM1 405 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SSTR1P30872 391 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 CAV1Q03135 178 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 FGD4Q96M96 766 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SAE1Q9UBE0 346 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 PCSK1NQ9UHG2 260 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 USP54Q70EL1 1684 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 H3BRJ5 948 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 CETPP11597 493 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 PECAM1P16284 738 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 RFX1P22670 979 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 ACOT2P49753 483 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 EPHB1P54762 984 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 MIS18BP1Q6P0N0 1132 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 ARHGAP24Q8N264 748 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SLC25A41Q8N5S1 370 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SHCBP1LQ9BZQ2 653 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 IRAK4Q9NWZ3 460 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SLC5A4Q9NY91 659 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 ADAMTS7Q9UKP4 1686 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 LRRIQ4A6NIV6 560 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 LPXNO60711 386 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 BBOX1O75936 387 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 PGM1P36871 562 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 MRPS35P82673 323 aaKnown RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 FMO1Q01740 532 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 HIF1AQ16665 826 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 RNF220Q5VTB9 566 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 ACAD10Q6JQN1 1059 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 C3orf62Q6ZUJ4 267 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 MORC4Q8TE76 937 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 FHDC1Q9C0D6 1143 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 MAD1L1Q9Y6D9 718 aa12.05□□□□□ -0.48
PCDHGA11-203ENST00000622044 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 F5H423 210 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KRT36O76013 467 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 TM4SF1P30408 202 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SERPINB6P35237 376 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 TMPRSS15P98073 1019 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 TRAF1Q13077 416 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KPNB1Q14974 876 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 DNAJC24Q6P3W2 148 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 TLDC1Q6P9B6 456 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 FOXR2Q6PJQ5 311 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CEP128Q6ZU80 1094 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 TSSK1BQ9BXA7 367 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 FBXO6Q9NRD1 293 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 DNPEPQ9ULA0 475 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CHRNB2P17787 502 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 GNA15P30679 374 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 C1orf146Q5VVC0 180 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KRT27Q7Z3Y8 459 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms