RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 SPG21Q9NZD8 308 aa14.59□□□□□ -0.07
MUC1-229ENST00000620770 MAGEC2Q9UBF1 373 aaPredicted RBP14.59□□□□□ -0.07
MUC1-229ENST00000620770 PDCD11Q14690 1871 aaKnown RBP14.59□□□□□ -0.07
MUC1-229ENST00000620770 NCOR1O75376 2440 aa14.58□□□□□ -0.07
MUC1-229ENST00000620770 ATG2AQ2TAZ0 1938 aa14.58□□□□□ -0.07
MUC1-229ENST00000620770 TRIP11Q15643 1979 aa14.58□□□□□ -0.07
MUC1-229ENST00000620770 PHACTR2O75167 634 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 FGF18O76093 207 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 B3GAT3O94766 335 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 ITGB1P05556 798 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 CYP3A5P20815 502 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 IGFBP6P24592 240 aaPredicted RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 PPM1AP35813 382 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 GCLMP48507 274 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 ZNF165P49910 485 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 MYL5Q02045 173 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 DUOXA2Q1HG44 320 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 NT5DC4Q86YG4 428 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 C1orf127Q8N9H9 656 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 C3orf58Q8NDZ4 430 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 ENOX1Q8TC92 643 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 ZNF516Q92618 1163 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 HLA-CQ95604 372 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 TSPAN18Q96SJ8 248 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 THAP9Q9H5L6 903 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 METTL14Q9HCE5 456 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 ALG13Q9NP73 1137 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 SAMSN1Q9NSI8 373 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.08
MUC1-229ENST00000620770 BRWD1Q9NSI6 2320 aa14.58□□□□□ -0.08
MUC1-229ENST00000620770 I3L4J1 428 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 TADA2AO75478 443 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 GNA14O95837 355 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 LRPAP1P30533 357 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 RPL9P32969 192 aaKnown RBP14.57□□□□□ -0.08
MUC1-229ENST00000620770 CA8P35219 290 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 MTIF2P46199 727 aaKnown RBP14.57□□□□□ -0.08
MUC1-229ENST00000620770 GPM6BQ13491 265 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 PTPROQ16827 1216 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 UPP1Q16831 310 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 C1orf220Q5T0J3 134 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 C9orf57Q5W0N0 161 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 SCARA3Q6AZY7 606 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 FRMD5Q7Z6J6 570 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 FAM114A1Q8IWE2 563 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
MUC1-229ENST00000620770 BORCS6Q96GS4 357 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 IGSF21Q96ID5 467 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 TSPY26PQ9H489 355 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 ADAM28Q9UKQ2 775 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 NUB1Q9Y5A7 615 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 XIRP2A4UGR9 3374 aa14.57□□□□□ -0.08
MUC1-229ENST00000620770 BECN2A8MW95 431 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 PIK3CAP42336 1068 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 BRCC3P46736 316 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 KCNQ1P51787 676 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 PPP3CAQ08209 521 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 TRPC3Q13507 836 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 TIGD5Q53EQ6 642 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 TDRD10Q5VZ19 366 aaKnown RBP14.56□□□□□ -0.08
MUC1-229ENST00000620770 DCLRE1AQ6PJP8 1040 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 LRSAM1Q6UWE0 723 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 TRAPPC11Q7Z392 1133 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 IRF2BP1Q8IU81 584 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 MRPL38Q96DV4 380 aaKnown RBP14.56□□□□□ -0.08
MUC1-229ENST00000620770 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 CBX8Q9HC52 389 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.56□□□□□ -0.08
MUC1-229ENST00000620770 FANCLQ9NW38 375 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 SIX4Q9UIU6 781 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 ITGA11Q9UKX5 1188 aa14.56□□□□□ -0.08
MUC1-229ENST00000620770 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
MUC1-229ENST00000620770 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.56□□□□□ -0.08
MUC1-229ENST00000620770 CARNS1A5YM72 827 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 PES1O00541 588 aaKnown RBP14.55□□□□□ -0.08
MUC1-229ENST00000620770 GRM6O15303 877 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 STX10O60499 249 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 RB1P06400 928 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 MXI1P50539 228 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 AP3M2P53677 418 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 RBP5P82980 135 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 KRT17Q04695 432 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 KCNJ12Q14500 433 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 FUT10Q6P4F1 479 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 SV2AQ7L0J3 742 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 TRIM59Q8IWR1 403 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 DHX40Q8IX18 779 aaKnown RBP14.55□□□□□ -0.08
MUC1-229ENST00000620770 SLC35C1Q96A29 364 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 ELMO3Q96BJ8 720 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 ZNF560Q96MR9 790 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 BPIFA3Q9BQP9 254 aa14.55□□□□□ -0.08
MUC1-229ENST00000620770 VN1R3Q9BXE9 311 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms