RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 DCCP43146 1447 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 ZSCAN5CA6NGD5 496 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 FAM47DPA6NHR8 397 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 CAND2O75155 1236 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 TRPA1O75762 1119 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 NFKBIAP25963 317 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 PDCD2Q16342 344 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 FAM102AQ5T9C2 384 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 SLC13A5Q86YT5 568 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 TEX2Q8IWB9 1127 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 KCTD17Q8N5Z5 321 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 C3orf20Q8ND61 904 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 SNX19Q92543 992 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 TMEM143Q96AN5 459 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 PPWD1Q96BP3 646 aaKnown RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 SERPINI1Q99574 410 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 CARD9Q9H257 536 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 LTN1O94822 1766 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 ENTPD3O75355 529 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 APOEP02649 317 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 ATP6V1E1P36543 226 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 AARSP49588 968 aaKnown RBP eCLIP8.8□□□□□ -1
ALMS1-208ENST00000620466 TSPY1Q01534 308 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 COG2Q14746 738 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 BZW1Q7L1Q6 419 aaKnown RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 CREG2Q8IUH2 290 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 ST13P4Q8IZP2 240 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 ZNF507Q8TCN5 953 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 CENPKQ9BS16 269 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 KRT82Q9NSB4 513 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 HOXC10Q9NYD6 342 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 PSMC3IPQ9P2W1 217 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 POLLQ9UGP5 575 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 PIK3R2O00459 728 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 CDH16O75309 829 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 SYF2O95926 243 aaKnown RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 CHEK2O96017 543 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 TAC1P20366 129 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 HADHAP40939 763 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 MAGEA4P43358 317 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 MTMR2Q13614 643 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 RBBP7Q16576 425 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 ACAD10Q6JQN1 1059 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 NUDCD3Q8IVD9 361 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 GCOM2Q9BZD3 368 aaPredicted RBP8.8□□□□□ -1
ALMS1-208ENST00000620466 SENP1Q9P0U3 644 aa8.8□□□□□ -1
ALMS1-208ENST00000620466 SNRPFP62306 86 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 SPP2Q13103 211 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 VPS72Q15906 364 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 MOXD1Q6UVY6 613 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 C2orf40Q9H1Z8 148 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PABPC3Q9H361 631 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 BCL9O00512 1426 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 LOC102724159A0A0B4J2E5 919 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 F8VZ95 297 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 SNX2O60749 519 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 AKAP3O75969 853 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 CHRNA5P30532 468 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PWP2Q15269 919 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 MDH1BQ5I0G3 518 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 ZNF467Q7Z7K2 595 aaPredicted RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 VPS11Q9H270 941 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 ACAD9Q9H845 621 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 XPO7Q9UIA9 1087 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.79□□□□□ -1
ALMS1-208ENST00000620466 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
ALMS1-208ENST00000620466 APOL1O14791 398 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PJA2O43164 708 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 DIAPH2O60879 1101 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PHKA2P46019 1235 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 CDH6P55285 790 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PSMC6P62333 389 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 SMAD1Q15797 465 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 GRAMD1BQ3KR37 738 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 HSP90AA5PQ58FG0 334 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 CDKL3Q8IVW4 592 aaPredicted RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 AGBL1Q96MI9 1066 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 RIT2Q99578 217 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 NUDT12Q9BQG2 462 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 KIFC3Q9BVG8 833 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 ZNF70Q9UC06 446 aaPredicted RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 LRRC10BA6NIK2 292 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 HLA-DRAP01903 254 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 ITIH4Q14624 930 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 MIIPQ5JXC2 388 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 PIP4K2CQ8TBX8 421 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 KCNH7Q9NS40 1196 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 BLOC1S4Q9NUP1 217 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 THEGQ9P2T0 379 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 MID2Q9UJV3 735 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 RALAP11233 206 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 SDC4P31431 198 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 SREBF1P36956 1147 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 FNTAP49354 379 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 AP2B1P63010 937 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 CYB5D1Q6P9G0 228 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms