RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF148Q9UQR1 794 aa11.5□□□□□ -0.57
FAM3A-221ENST00000612856 STRNO43815 780 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PLS3P13797 630 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 NT5C2P49902 561 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PPP2R2AP63151 447 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 AMPD2Q01433 879 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 QPCTQ16769 361 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 GPD1LQ8N335 351 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 UBL4BQ8N7F7 174 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 SLC17A8Q8NDX2 589 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 HSPH1Q92598 858 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ADAM22Q9P0K1 906 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 MYH6P13533 1939 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 RBAK-RBAKDNI3L0D1 243 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 KRIT1O00522 736 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 SHOX2O60902 331 aaPredicted RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 AKR1A1P14550 325 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PRPHP41219 470 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 RARRES1P49788 294 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 OTOP1Q7RTM1 612 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 NEK9Q8TD19 979 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF483Q8TF39 744 aaPredicted RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 AENQ8WTP8 325 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ARHGEF2Q92974 986 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 SEPT5Q99719 369 aaPredicted RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 DDX47Q9H0S4 455 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 H7C0C1 242 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 I3L4J1 428 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 TOMM70O94826 608 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ITGB3P05106 788 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ATP5OP48047 213 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 FNTAP49354 379 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF211Q13398 564 aaPredicted RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 GRIK4Q16099 956 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 ECM1Q16610 540 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 KRT39Q6A163 491 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 KDM7AQ6ZMT4 941 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PGLYRP2Q96PD5 576 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 MTMR12Q9C0I1 747 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PAPOLBQ9NRJ5 636 aaKnown RBP11.49□□□□□ -0.57
FAM3A-221ENST00000612856 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 FBXL5Q9UKA1 691 aa11.49□□□□□ -0.57
FAM3A-221ENST00000612856 NKRFO15226 690 aaKnown RBP eCLIP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 ITGA4P13612 1032 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 FKBP1AP62942 108 aaKnown RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF200P98182 395 aaPredicted RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 NCOA4Q13772 614 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 PCNX4Q63HM2 1172 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 UBA3Q8TBC4 463 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 RAPGEF5Q92565 580 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 MKL1Q969V6 931 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CERS4Q9HA82 394 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 TXNDC16Q9P2K2 825 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 RASAL2Q9UJF2 1139 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 NT5C1B-RDH14C9J2C7 533 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CALCAP01258 141 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CXCL8P10145 99 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CPA5Q8WXQ8 436 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 SH3GL2Q99962 352 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 OSBPL7Q9BZF2 842 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 TRPC7Q9HCX4 862 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 BATF3Q9NR55 127 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 PALMO75781 387 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 GBP1P32455 592 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 LAMB3Q13751 1172 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 KDELC2Q7Z4H8 507 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CTAGE3PQ8IX95 158 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 GDAP1Q8TB36 358 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 CHMP6Q96FZ7 201 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 PNMA5Q96PV4 448 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 YME1L1Q96TA2 773 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
FAM3A-221ENST00000612856 KATNAL1Q9BW62 490 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 APOL5Q9BWW9 433 aa11.48□□□□□ -0.57
FAM3A-221ENST00000612856 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 LBX2Q6XYB7 198 aa11.47□□□□□ -0.57
FAM3A-221ENST00000612856 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
FAM3A-221ENST00000612856 CCDC33Q8N5R6 958 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms