RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 E2F5Q15329 346 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 PPP4R4Q6NUP7 873 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 ATPAF2Q8N5M1 289 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
TNXB-208ENST00000611016 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
TNXB-208ENST00000611016 IGSF9BQ9UPX0 1349 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 HNRNPCL2B2RXH8 293 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 PRPF4O43172 522 aaKnown RBP eCLIP16.44■□□□□ 0.22
TNXB-208ENST00000611016 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 AP2B1P63010 937 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 EFTUD2Q15029 972 aaKnown RBP eCLIP16.44■□□□□ 0.225e-6■■■□□ 16.1
TNXB-208ENST00000611016 KRT35Q92764 455 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 PTPRMP28827 1452 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 RPSAP08865 295 aaKnown RBP16.44■□□□□ 0.22
TNXB-208ENST00000611016 THPOP40225 353 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 OCA2Q04671 838 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 RAB42Q8N4Z0 105 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 ATP6V1G3Q96LB4 118 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 TSSK1BQ9BXA7 367 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 PCDHB8Q9UN66 801 aa16.44■□□□□ 0.22
TNXB-208ENST00000611016 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 EXTL3O43909 919 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 DIAPH2O60879 1101 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 ANKMY2Q8IV38 441 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 CASS4Q9NQ75 786 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 EHD2Q9NZN4 543 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 SNX5Q9Y5X3 404 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 EEF2KO00418 725 aaKnown RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 SYF2O95926 243 aaKnown RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 RPA1P27694 616 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 PCSK1P29120 753 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 CYP2C19P33261 490 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 OR9Q1Q8NGQ5 310 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 GPRASP2Q96D09 838 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 MAP3K14Q99558 947 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 UNC45AQ9H3U1 944 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 UCHL3P15374 230 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 ARFIP2P53365 341 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNXB-208ENST00000611016 TBC1D1Q86TI0 1168 aaPredicted RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 DPF2Q92785 391 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 TMEM117Q9H0C3 514 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 ANLNQ9NQW6 1124 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
TNXB-208ENST00000611016 KCNA4P22459 653 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 PPP4CP60510 307 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 LRIG3Q6UXM1 1119 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 NUDCD3Q8IVD9 361 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 PIP4K2CQ8TBX8 421 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 CYTH2Q99418 400 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNXB-208ENST00000611016 ITM2BQ9Y287 266 aa16.43■□□□□ 0.22
TNXB-208ENST00000611016 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 C2CD2LO14523 706 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 KRT16P08779 473 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 EPHX2P34913 555 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 GGCXP38435 758 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 PDCLQ13371 301 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 GTF2H3Q13889 308 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 DDIASQ8IXT1 998 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 SCHIP1Q9P0W5 487 aaPredicted RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 E2F6O75461 281 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNXB-208ENST00000611016 C4orf22Q6V702 233 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 CATSPER3Q86XQ3 398 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 ARHGAP18Q8N392 663 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 SLC7A14Q8TBB6 771 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 FAM129AQ9BZQ8 928 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 SYNDIG1Q9H7V2 258 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 COG4Q9H9E3 785 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 BRAFP15056 766 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 MTF1Q14872 753 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 TARS2Q9BW92 718 aaKnown RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 STX18Q9P2W9 335 aaKnown RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 PRG3Q9Y2Y8 225 aaPredicted RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 ZNF197O14709 1029 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 GNL1P36915 607 aaPredicted RBP16.42■□□□□ 0.22
TNXB-208ENST00000611016 ALDH1A3P47895 512 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 HIF1AQ16665 826 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 PLEKHH3Q7Z736 793 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 CLMNQ96JQ2 1002 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 NSMCE4AQ9NXX6 385 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 ZFATQ9P243 1243 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 AMACRQ9UHK6 382 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 GALCP54803 685 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 WWP1Q9H0M0 922 aa16.42■□□□□ 0.22
TNXB-208ENST00000611016 SMYD3Q9H7B4 428 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms