RNA–Protein interactions for RNA: ENST00000609041.1

TAF4-208, Transcript of TATA-box binding protein associated factor 4, human

Gene TAF4, Length 2,487 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-208	ENST00000609041	SNF8	Q96H20	258 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	CCDC114	Q96M63	670 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	ADAM22	Q9P0K1	906 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	FBXO40	Q9UH90	709 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	NAMPT	P43490	491 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	TAS2R40	P59535	323 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	ACTN3	Q08043	901 aa	Predicted RBP	20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	PTK6	Q13882	451 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	SPRED3	Q2MJR0	410 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	ABRA	Q8N0Z2	381 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	FAM118B	Q9BPY3	351 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	MSTO1	Q9BUK6	570 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	CCDC113	Q9H0I3	377 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	EFCC1	Q9HA90	598 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	INTS9	Q9NV88	658 aa	Known RBP	20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	DNAJC17	Q9NVM6	304 aa	Known RBP	20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	KCNG1	Q9UIX4	513 aa		20.68	■□□□□ 0.9
TAF4-208	ENST00000609041	VGLL3	A8MV65	326 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	C19orf81	C9J6K1	198 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	ITGA8	P53708	1063 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	MAMLD1	Q13495	774 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SEZ6	Q53EL9	994 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	LIN9	Q5TKA1	542 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SCARA3	Q6AZY7	606 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	DEFB132	Q7Z7B7	95 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	OR5B17	Q8NGF7	314 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SPDYE16	A6NNV3	312 aa	Predicted RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	GAS8	O95995	478 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	PIGR	P01833	764 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	MAN1A1	P33908	653 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	ARL2	P36404	184 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	VPS41	P49754	854 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	TGFB2	P61812	414 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	NOP14	P78316	857 aa	Known RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	KLF1	Q13351	362 aa	Predicted RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SLFN12L	Q6IEE8	588 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	MFSD5	Q6N075	450 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	KCNV1	Q6PIU1	500 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	MMS22L	Q6ZRQ5	1243 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SYDE1	Q6ZW31	735 aa	Predicted RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	CCDC13	Q8IYE1	715 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	SLC7A3	Q8WY07	619 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	PRMT1	Q99873	361 aa	Known RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	STMN4	Q9H169	189 aa	Predicted RBP	20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	NUB1	Q9Y5A7	615 aa		20.67	■□□□□ 0.9
TAF4-208	ENST00000609041	ATG7	O95352	703 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	GJB6	O95452	261 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	CLTA	P09496	248 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	CNTN2	Q02246	1040 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	PTP4A2	Q12974	167 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	STXBP2	Q15833	593 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	ANGEL2	Q5VTE6	544 aa	Known RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	SEPT14	Q6ZU15	432 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	RBBP8NL	Q8NC74	664 aa	Predicted RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	ATL2	Q8NHH9	583 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	GRK7	Q8WTQ7	553 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	JPH2	Q9BR39	696 aa	Predicted RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	ROPN1B	Q9BZX4	212 aa	Predicted RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	ROPN1	Q9HAT0	212 aa	Predicted RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	MYH9	P35579	1960 aa	Known RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041		A0A0B4J269	797 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	GOLGA6L7	A0A1B0GV03	622 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	HARS	P12081	509 aa	Known RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	HNRNPH1	P31943	449 aa	Known RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	GJC1	P36383	396 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	DRP2	Q13474	957 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	TRIM72	Q6ZMU5	477 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	ANKS1B	Q7Z6G8	1248 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	RHOT1	Q8IXI2	618 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	BBX	Q8WY36	941 aa	Predicted RBP	20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	CGRRF1	Q99675	332 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	UST	Q9Y2C2	406 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	CNTNAP2	Q9UHC6	1331 aa		20.66	■□□□□ 0.9
TAF4-208	ENST00000609041	THAP12	O43422	761 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	PSTPIP1	O43586	416 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	ATF2	P15336	505 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	ADCY8	P40145	1251 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	EXOC3L1	Q86VI1	746 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	PWWP2A	Q96N64	755 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	MTFR1L	Q9H019	292 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	MRPL47	Q9HD33	250 aa	Known RBP	20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	PEX10	O60683	326 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	LDHA	P00338	332 aa	Known RBP	20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	PLEKHA7	Q6IQ23	1121 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	SLC16A10	Q8TF71	515 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	KCNN1	Q92952	543 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	NEU2	Q9Y3R4	380 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	ADGRA2	Q96PE1	1338 aa		20.65	■□□□□ 0.9
TAF4-208	ENST00000609041	TLR3	O15455	904 aa	Known RBP	20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	CD58	P19256	250 aa		20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	SSR1	P43307	286 aa	Known RBP	20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	TAOK1	Q7L7X3	1001 aa		20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	PHF13	Q86YI8	300 aa	Predicted RBP	20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	SCLT1	Q96NL6	688 aa		20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	TRAIP	Q9BWF2	469 aa		20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	HOXC10	Q9NYD6	342 aa		20.64	■□□□□ 0.9
TAF4-208	ENST00000609041	DNM1L	O00429	736 aa		20.64	■□□□□ 0.89
TAF4-208	ENST00000609041	TTC4	O95801	387 aa		20.64	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms