RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PIRO00625 290 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 SPTLC1O15269 473 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 AMHP03971 560 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 DSC1Q08554 894 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 KLHDC7AQ5VTJ3 777 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 SPECC1LQ69YQ0 1117 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 PSRC1Q6PGN9 363 aaPredicted RBP24.7■■□□□ 1.54
IRF3-227ENST00000600911 CD300LGQ6UXG3 332 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 FAM43BQ6ZT52 329 aaPredicted RBP24.7■■□□□ 1.54
IRF3-227ENST00000600911 GPIHBP1Q8IV16 184 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 HERVK_113Q902F9 699 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 ZNF689Q96CS4 500 aaPredicted RBP24.7■■□□□ 1.54
IRF3-227ENST00000600911 ARID3AQ99856 593 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 LBHD1Q9BQE6 289 aaPredicted RBP24.7■■□□□ 1.54
IRF3-227ENST00000600911 ITGA11Q9UKX5 1188 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 POLIQ9UNA4 740 aa24.7■■□□□ 1.54
IRF3-227ENST00000600911 ASS1P00966 412 aaKnown RBP24.69■■□□□ 1.54
IRF3-227ENST00000600911 TPM3P06753 285 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 CYP3A5P20815 502 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 LRPAP1P30533 357 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 FXR1P51114 621 aaKnown RBP eCLIP24.69■■□□□ 1.54
IRF3-227ENST00000600911 IQCEQ6IPM2 695 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 RRAGAQ7L523 313 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 CPLX3Q8WVH0 158 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 NRDE2Q9H7Z3 1164 aa24.69■■□□□ 1.54
IRF3-227ENST00000600911 ITGB1P05556 798 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 NOP14P78316 857 aaKnown RBP24.68■■□□□ 1.54
IRF3-227ENST00000600911 ARID5BQ14865 1188 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 COLGALT2Q8IYK4 626 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 KREMEN1Q96MU8 473 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 PLCB1Q9NQ66 1216 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 EFCAB14O75071 495 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 PNMA6AP0CW24 399 aaPredicted RBP24.68■■□□□ 1.54
IRF3-227ENST00000600911 PBX3P40426 434 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 TUSC3Q13454 348 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 TRPC3Q13507 836 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 RASIP1Q5U651 963 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.68■■□□□ 1.54
IRF3-227ENST00000600911 TSPAN18Q96SJ8 248 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 NAA15Q9BXJ9 866 aaKnown RBP24.68■■□□□ 1.54
IRF3-227ENST00000600911 NLRC4Q9NPP4 1024 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 NR2E3Q9Y5X4 410 aa24.68■■□□□ 1.54
IRF3-227ENST00000600911 PODXLO00592 558 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 UCHL3P15374 230 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 CASP14P31944 242 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 KCNJ6P48051 423 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 POLR2FP61218 127 aaKnown RBP24.67■■□□□ 1.54
IRF3-227ENST00000600911 RBP5P82980 135 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 UPP1Q16831 310 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 ABI1Q8IZP0 508 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 URGCPQ8TCY9 931 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 BAP1Q92560 729 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 GPR88Q9GZN0 384 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 APEX2Q9UBZ4 518 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 TSC2P49815 1807 aa24.67■■□□□ 1.54
IRF3-227ENST00000600911 H0YGN5 161 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 SHHQ15465 462 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 ZNF699Q32M78 642 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 E4F1Q66K89 784 aaPredicted RBP24.66■■□□□ 1.54
IRF3-227ENST00000600911 FAM109BQ6ICB4 259 aaPredicted RBP24.66■■□□□ 1.54
IRF3-227ENST00000600911 DRC7Q8IY82 874 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 NEK11Q8NG66 645 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 HASPINQ8TF76 798 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 HPDLQ96IR7 371 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 SDCBP2Q9H190 292 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 CWH43Q9H720 699 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 SLC38A7Q9NVC3 462 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 DNAJC12Q9UKB3 198 aa24.66■■□□□ 1.54
IRF3-227ENST00000600911 XPOTO43592 962 aaKnown RBP24.65■■□□□ 1.54
IRF3-227ENST00000600911 CETN1Q12798 172 aa24.65■■□□□ 1.54
IRF3-227ENST00000600911 SCARA5Q6ZMJ2 495 aa24.65■■□□□ 1.54
IRF3-227ENST00000600911 UBE2TQ9NPD8 197 aaPredicted RBP24.65■■□□□ 1.54
IRF3-227ENST00000600911 VWA8A3KMH1 1905 aa24.65■■□□□ 1.54
IRF3-227ENST00000600911 HOXA2O43364 376 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 CAPN15O75808 1086 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 TRIM21P19474 475 aaKnown RBP24.64■■□□□ 1.54
IRF3-227ENST00000600911 ASPAP45381 313 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 RAP1GAPP47736 663 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 SGSM1Q2NKQ1 1148 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 TMEM173Q86WV6 379 aaPredicted RBP24.64■■□□□ 1.54
IRF3-227ENST00000600911 PPM1KQ8N3J5 372 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 NT5C1BQ96P26 610 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 NXF1Q9UBU9 619 aaKnown RBP24.64■■□□□ 1.54
IRF3-227ENST00000600911 LAMA3Q16787 3333 aa24.64■■□□□ 1.54
IRF3-227ENST00000600911 I3L4J1 428 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 KIF4AO95239 1232 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 GJB5O95377 273 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 ADKP55263 362 aaKnown RBP24.64■■□□□ 1.53
IRF3-227ENST00000600911 RNASELQ05823 741 aaKnown RBP24.64■■□□□ 1.53
IRF3-227ENST00000600911 ARHGAP44Q17R89 818 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 BCL7CQ8WUZ0 217 aaPredicted RBP24.64■■□□□ 1.53
IRF3-227ENST00000600911 SMYD3Q9H7B4 428 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 VRTNQ9H8Y1 702 aa24.64■■□□□ 1.53
IRF3-227ENST00000600911 NT5C1B-RDH14C9J2C7 533 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 ZC3H11AO75152 810 aaKnown RBP eCLIP24.63■■□□□ 1.535e-8■■■■□ 20.6
IRF3-227ENST00000600911 BRCC3P46736 316 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 SLC11A1P49279 550 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 CDH8P55286 799 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 LILRA4P59901 499 aa24.63■■□□□ 1.53
IRF3-227ENST00000600911 WDR72Q3MJ13 1102 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms