RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 ZNF512Q96ME7 567 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-207ENST00000600244 CACNA2D2Q9NY47 1150 aa19.47■□□□□ 0.71
SSBP4-207ENST00000600244 DCLK1O15075 740 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 ATG13O75143 517 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 YWHABP31946 246 aaKnown RBP19.46■□□□□ 0.71
SSBP4-207ENST00000600244 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
SSBP4-207ENST00000600244 PPP2R5CQ13362 524 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 NECTIN1Q15223 517 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 ADAM32Q8TC27 787 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 ZFYVE19Q96K21 471 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 VAV3Q9UKW4 847 aa19.46■□□□□ 0.71
SSBP4-207ENST00000600244 I3L4J1 428 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 ZBTB39O15060 712 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 PRPF3O43395 683 aaKnown RBP19.45■□□□□ 0.7
SSBP4-207ENST00000600244 RECQL4O94761 1208 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 ARL2P36404 184 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 RCAN1P53805 252 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 ARHGAP29Q52LW3 1261 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 XKR9Q5GH70 373 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 ELMOD1Q8N336 334 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 TMEM209Q96SK2 561 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 LRRC3Q9BY71 257 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 LSG1Q9H089 658 aaKnown RBP19.45■□□□□ 0.7
SSBP4-207ENST00000600244 ASAH2Q9NR71 780 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 POLR3BQ9NW08 1133 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-207ENST00000600244 NUP205Q92621 2012 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 BPTFQ12830 3046 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 NAV2Q8IVL1 2488 aa19.45■□□□□ 0.7
SSBP4-207ENST00000600244 PATE3B3GLJ2 98 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 MEFVO15553 781 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-207ENST00000600244 TRAPPC3O43617 180 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 BRCC3P46736 316 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 CLCNKBP51801 687 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 IRX4P78413 519 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 KARSQ15046 597 aaKnown RBP19.44■□□□□ 0.7
SSBP4-207ENST00000600244 UPP1Q16831 310 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 UAP1L1Q3KQV9 507 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 TMEM196Q5HYL7 178 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 TPGS2Q68CL5 300 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 ARID3BQ8IVW6 561 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-207ENST00000600244 ABCA7Q8IZY2 2146 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 C3orf58Q8NDZ4 430 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
SSBP4-207ENST00000600244 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 CYSRT1A8MQ03 144 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 GLRA2P23416 452 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 ARPP19P56211 112 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-207ENST00000600244 TNK2Q07912 1038 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 TWF1Q12792 350 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 MRPL58Q14197 206 aaKnown RBP19.43■□□□□ 0.7
SSBP4-207ENST00000600244 C8orf34Q49A92 452 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 FSTL4Q6MZW2 842 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 MOXD1Q6UVY6 613 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 PIP4P1Q86T03 277 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 GPIHBP1Q8IV16 184 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 MKNK1Q9BUB5 465 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 SLC32A1Q9H598 525 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 SLITRK6Q9H5Y7 841 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 ATG2BQ96BY7 2078 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 ASXL3Q9C0F0 2248 aa19.43■□□□□ 0.7
SSBP4-207ENST00000600244 SPAARA0A1B0GVQ0 90 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 TBX3O15119 743 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 PRKCBP05771 671 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 GLIS3Q8NEA6 775 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 PPP1R10Q96QC0 940 aaKnown RBP19.42■□□□□ 0.7
SSBP4-207ENST00000600244 HHIPQ96QV1 700 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 LXNQ9BS40 222 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 OBP2AQ9NY56 170 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 RGL1Q9NZL6 768 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 EBF1Q9UH73 591 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 FBXL5Q9UKA1 691 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 MAFFQ9ULX9 164 aa19.42■□□□□ 0.7
SSBP4-207ENST00000600244 TTLL13PA6NNM8 815 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 H0Y626 953 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 TRIM16O95361 564 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 SIM1P81133 766 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-207ENST00000600244 SCAPQ12770 1279 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 EPHA7Q15375 998 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 PMS2CLQ68D20 193 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 HAUS6Q7Z4H7 955 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 TMC8Q8IU68 726 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 CHCHD4Q8N4Q1 142 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 CCDC148Q8NFR7 591 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 PRIMPOLQ96LW4 560 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 UROC1Q96N76 676 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 C22orf23Q9BZE7 217 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 PDZD7Q9H5P4 517 aa19.41■□□□□ 0.7
SSBP4-207ENST00000600244 AFF4Q9UHB7 1163 aaKnown RBP19.41■□□□□ 0.7
SSBP4-207ENST00000600244 CCDC196A0A1B0GTZ2 297 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 A0A1W2PRU2 124 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 TRDMT1O14717 391 aaKnown RBP19.4■□□□□ 0.7
SSBP4-207ENST00000600244 EPB41L2O43491 1005 aaKnown RBP19.4■□□□□ 0.7
SSBP4-207ENST00000600244 PLCB2Q00722 1185 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 ITPRIPL2Q3MIP1 535 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 STXBP5Q5T5C0 1151 aa19.4■□□□□ 0.7
SSBP4-207ENST00000600244 DHX32Q7L7V1 743 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms