RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 PPM1LQ5SGD2 360 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 RSPO2Q6UXX9 243 aaPredicted RBP13.11□□□□□ -0.31
TPM4-212ENST00000590180 C15orf39Q6ZRI6 1047 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 ACSF2Q96CM8 615 aaPredicted RBP13.11□□□□□ -0.31
TPM4-212ENST00000590180 SUSD3Q96L08 255 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 SCAND2PQ9GZW5 306 aaPredicted RBP13.11□□□□□ -0.31
TPM4-212ENST00000590180 ASB7Q9H672 318 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 NFICP08651 508 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 SLFN14P0C7P3 912 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 PFKFB1P16118 471 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 ELF1P32519 619 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
TPM4-212ENST00000590180 CUL4BQ13620 913 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 CTXN3Q4LDR2 81 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 ARMCX5Q6P1M9 558 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 CNNM4Q6P4Q7 775 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
TPM4-212ENST00000590180 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 OTOP3Q7RTS5 596 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 USP37Q86T82 979 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 TDRD5Q8NAT2 981 aaKnown RBP13.1□□□□□ -0.31
TPM4-212ENST00000590180 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 LRFN3Q9BTN0 628 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 ZDHHC7Q9NXF8 308 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 FBXW11Q9UKB1 542 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 POLIQ9UNA4 740 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 DERAQ9Y315 318 aa13.1□□□□□ -0.31
TPM4-212ENST00000590180 TIMM13Q9Y5L4 95 aaPredicted RBP13.1□□□□□ -0.31
TPM4-212ENST00000590180 MYO10Q9HD67 2058 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 GPR37L1O60883 481 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 IL18RAPO95256 599 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 C8AP07357 584 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 SYKP43405 635 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 NUCB2P80303 420 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 TFAMQ00059 246 aaKnown RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 C9orf57Q5W0N0 161 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 ZSWIM2Q8NEG5 633 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 EDAQ92838 391 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 ZNF707Q96C28 371 aaPredicted RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 GDPD2Q9HCC8 539 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
TPM4-212ENST00000590180 SLC39A2Q9NP94 309 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 FBXL5Q9UKA1 691 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
TPM4-212ENST00000590180 MYH15Q9Y2K3 1946 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 M0QZQ0 153 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 PIRO00625 290 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 PPEF2O14830 753 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 CCL16O15467 120 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 EXTL3O43909 919 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 HNRNPA1P09651 372 aaKnown RBP eCLIP13.08□□□□□ -0.32
TPM4-212ENST00000590180 LILRA4P59901 499 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 ZXDAP98168 799 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 ROR1Q01973 937 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
TPM4-212ENST00000590180 UVSSAQ2YD98 709 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 ZNF280DQ6N043 979 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 ZDHHC14Q8IZN3 488 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 SLC7A14Q8TBB6 771 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 SENP8Q96LD8 212 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
TPM4-212ENST00000590180 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.32
TPM4-212ENST00000590180 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 PRRG1O14668 218 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
TPM4-212ENST00000590180 CLIC2O15247 247 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
TPM4-212ENST00000590180 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
TPM4-212ENST00000590180 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 XYLBO75191 536 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 ABLIM3O94929 683 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms