RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
APBA3-205ENST00000590064 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 SEPT9Q9UHD8 586 aaPredicted RBP17.09■□□□□ 0.33
APBA3-205ENST00000590064 PCSK1NQ9UHG2 260 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 COG5Q9UP83 839 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ECHS1P30084 290 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 PDE1BQ01064 536 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 SLFN11Q7Z7L1 901 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 FAM228AQ86W67 206 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
APBA3-205ENST00000590064 CHMP2BQ9UQN3 213 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 C5P01031 1676 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 BRD2P25440 801 aaKnown RBP17.09■□□□□ 0.33
APBA3-205ENST00000590064 PSMA2P25787 234 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 RNF43Q68DV7 783 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ZDHHC24Q6UX98 284 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 CEP70Q8NHQ1 597 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ANKRD27Q96NW4 1050 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ZDHHC18Q9NUE0 388 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 LRCH1Q9Y2L9 728 aa17.09■□□□□ 0.33
APBA3-205ENST00000590064 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
APBA3-205ENST00000590064 P4HBP07237 508 aaKnown RBP17.08■□□□□ 0.33
APBA3-205ENST00000590064 CENPCQ03188 943 aa17.08■□□□□ 0.33
APBA3-205ENST00000590064 EMC10Q5UCC4 262 aa17.08■□□□□ 0.33
APBA3-205ENST00000590064 NME8Q8N427 588 aa17.08■□□□□ 0.33
APBA3-205ENST00000590064 ACAP3Q96P50 834 aa17.08■□□□□ 0.33
APBA3-205ENST00000590064 MAGEA13PA6NCF6 341 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 PSMC4P43686 418 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 LAMB3Q13751 1172 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 WASHC2DQ5SRD0 308 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 HSPH1Q92598 858 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 FAM111AQ96PZ2 611 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 DCLK3Q9C098 648 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 BCL9O00512 1426 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 PIAS1O75925 651 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
APBA3-205ENST00000590064 DLG4P78352 724 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 BLMHQ13867 455 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.32
APBA3-205ENST00000590064 MAP7D1Q3KQU3 841 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 WDR75Q8IWA0 830 aaKnown RBP17.08■□□□□ 0.32
APBA3-205ENST00000590064 SCG3Q8WXD2 468 aaKnown RBP17.08■□□□□ 0.32
APBA3-205ENST00000590064 FAF2Q96CS3 445 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 MTFR1LQ9H019 292 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 EBF2Q9HAK2 575 aa17.08■□□□□ 0.32
APBA3-205ENST00000590064 FAF1Q9UNN5 650 aaPredicted RBP17.08■□□□□ 0.32
APBA3-205ENST00000590064 DKC1O60832 514 aaKnown RBP eCLIP17.07■□□□□ 0.32
APBA3-205ENST00000590064 CNGA1P29973 690 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 FAM13CQ8NE31 585 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 KIFC3Q9BVG8 833 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 TGFB1I1O43294 461 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 CALCAP01258 141 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 PDCD2Q16342 344 aaPredicted RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 DPPA5A6NC42 116 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 CRKP46108 304 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 HSP90AA5PQ58FG0 334 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 ARHGEF16Q5VV41 709 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 NXNQ6DKJ4 435 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 ZNF570Q96NI8 536 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 FOXP3Q9BZS1 431 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 IP6K2Q9UHH9 426 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 MED21Q13503 144 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 KPNB1Q14974 876 aaKnown RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 DAB2IPQ5VWQ8 1189 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 ARID3BQ8IVW6 561 aaPredicted RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 MAB21L3Q8N8X9 362 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
APBA3-205ENST00000590064 TOPORSQ9NS56 1045 aaPredicted RBP17.07■□□□□ 0.32
APBA3-205ENST00000590064 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
APBA3-205ENST00000590064 ADRA1DP25100 572 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 RPA3P35244 121 aaPredicted RBP17.06■□□□□ 0.32
APBA3-205ENST00000590064 DCAF12L1Q5VU92 463 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 WWP1Q9H0M0 922 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 STXBP5LQ9Y2K9 1186 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
APBA3-205ENST00000590064 N4BP2Q86UW6 1770 aaPredicted RBP17.06■□□□□ 0.32
APBA3-205ENST00000590064 WDR64B1ANS9 1081 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 CFLARO15519 480 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 ATP6V1C1P21283 382 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 GEMIN4P57678 1058 aaKnown RBP17.06■□□□□ 0.32
APBA3-205ENST00000590064 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
APBA3-205ENST00000590064 NFX1Q12986 1120 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms