RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 CYP11B1P15538 503 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 ATICP31939 592 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 MYL6P60660 151 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 PTK7Q13308 1070 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 PTGISQ16647 500 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 LHX8Q68G74 356 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 ZNF677Q86XU0 584 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 MYRIPQ8NFW9 859 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 SNX27Q96L92 541 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 ALS2CR12Q96Q35 445 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
CCBE1-203ENST00000589116 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 ITGA11Q9UKX5 1188 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 NUB1Q9Y5A7 615 aa12.94□□□□□ -0.34
CCBE1-203ENST00000589116 A0A0A6YYK5 440 aaPredicted RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 MACROD2A1Z1Q3 448 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 CAND2O75155 1236 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SGPL1O95470 568 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 GZMAP12544 262 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 KRT5P13647 590 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 ACO1P21399 889 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 CDR2Q01850 454 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 MGAT3Q09327 533 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 NOP9Q86U38 636 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 FAM228AQ86W67 206 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 UBR7Q8N806 425 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 ARRDC4Q8NCT1 418 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 ARID3AQ99856 593 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 XYLT2Q9H1B5 865 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 CHST12Q9NRB3 414 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 DUSP10Q9Y6W6 482 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 RANBP2P49792 3224 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 RPS6KA5O75582 802 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 CLSTN1O94985 981 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 IFI16Q16666 785 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SLC20A1Q8WUM9 679 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SEZ6LQ9BYH1 1024 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SNTG2Q9NY99 539 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
CCBE1-203ENST00000589116 NOC2LQ9Y3T9 749 aaKnown RBP12.93□□□□□ -0.34
CCBE1-203ENST00000589116 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 ITGB3P05106 788 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 TMEM253P0C7T8 217 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCBE1-203ENST00000589116 FMO1Q01740 532 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 ZNF667Q5HYK9 610 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 CXorf38Q8TB03 319 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 DDX1Q92499 740 aaKnown RBP12.92□□□□□ -0.34
CCBE1-203ENST00000589116 WNT8BQ93098 351 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 ELMO3Q96BJ8 720 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCBE1-203ENST00000589116 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 NXF3Q9H4D5 531 aaKnown RBP12.92□□□□□ -0.34
CCBE1-203ENST00000589116 SEPT11Q9NVA2 429 aaKnown RBP12.92□□□□□ -0.34
CCBE1-203ENST00000589116 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 STXBP5LQ9Y2K9 1186 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 PCDHB4Q9Y5E5 795 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 CAPN6Q9Y6Q1 641 aa12.92□□□□□ -0.34
CCBE1-203ENST00000589116 TRIP11Q15643 1979 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 NCANO14594 1321 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 A0A0U1RQG5 324 aaPredicted RBP12.91□□□□□ -0.34
CCBE1-203ENST00000589116 ANKRD62A6NC57 917 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 GPR182O15218 404 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
CCBE1-203ENST00000589116 RTN2O75298 545 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 RECQL4O94761 1208 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 MOCS3O95396 460 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 CHRNA1P02708 482 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 KRT19P08727 400 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 P4HA1P13674 534 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 CHRNB2P17787 502 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 ZNF132P52740 706 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 GALCP54803 685 aa12.91□□□□□ -0.34
CCBE1-203ENST00000589116 RBP5P82980 135 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms